This file documents the networking features in GNU Awk (gawk) version 3.1 and later.
This is Edition 1.1 of TCP/IP Internetworking With gawk, for the 3.1.4 (or later) version of the GNU implementation of AWK.
Copyright (C) 2000, 2001, 2002, 2004 Free Software Foundation, Inc.
Permission is granted to copy, distribute and/or modify this document under the terms of the GNU Free Documentation License, Version 1.2 or any later version published by the Free Software Foundation; with the Invariant Sections being “GNU General Public License”, the Front-Cover texts being (a) (see below), and with the Back-Cover Texts being (b) (see below). A copy of the license is included in the section entitled “GNU Free Documentation License”.
In May of 1997, Jürgen Kahrs felt the need for network access from awk, and, with a little help from me, set about adding features to do this for gawk. At that time, he wrote the bulk of this web page.
The code and documentation were added to the gawk 3.1 development tree, and languished somewhat until I could finally get down to some serious work on that version of gawk. This finally happened in the middle of 2000.
Meantime, Jürgen wrote an article about the Internet special files and `|&' operator for Linux Journal, and made a networking patch for the production versions of gawk available from his home page. In August of 2000 (for gawk 3.0.6), this patch also made it to the main GNU ftp distribution site.
For release with gawk, I edited Jürgen's prose for English grammar and style, as he is not a native English speaker. I also rearranged the material somewhat for what I felt was a better order of presentation, and (re)wrote some of the introductory material.
The majority of this document and the code are his work, and the high quality and interesting ideas speak for themselves. It is my hope that these features will be of significant value to the awk community.
Arnold Robbins
This chapter provides a (necessarily) brief intoduction to computer networking concepts. For many applications of gawk to TCP/IP networking, we hope that this is enough. For more advanced tasks, you will need deeper background, and it may be necessary to switch to lower-level programming in C or C++.
There are two real-life models for the way computers send messages to each other over a network. While the analogies are not perfect, they are close enough to convey the major concepts. These two models are the phone system (reliable byte-stream communications), and the postal system (best-effort datagrams).
When you make a phone call, the following steps occur:
The same steps occur in a duplex reliable computer networking connection. There is considerably more overhead in setting up the communications, but once it's done, data moves in both directions, reliably, in sequence.
Suppose you mail three different documents to your office on the other side of the country on two different days. Doing so entails the following.
The important characteristics of datagram communications, like those of the postal system are thus:
The price the user pays for the lower overhead of datagram communications is exactly the lower reliability; it is often necessary for user-level protocols that use datagram communications to add their own reliability features on top of the basic communications.
The Internet Protocol Suite (usually referred to as just TCP/IP)1 consists of a number of different protocols at different levels or “layers.” For our purposes, three protocols provide the fundamental communications mechanisms. All other defined protocols are referred to as user-level protocols (e.g., HTTP, used later in this web page).
All other user-level protocols use either TCP or UDP to do their basic communications. Examples are SMTP (Simple Mail Transfer Protocol), FTP (File Transfer Protocol), and HTTP (HyperText Transfer Protocol).
In the postal system, the address on an envelope indicates a physical location, such as a residence or office building. But there may be more than one person at a location; thus you have to further quantify the recipient by putting a person or company name on the envelope.
In the phone system, one phone number may represent an entire company, in which case you need a person's extension number in order to reach that individual directly. Or, when you call a home, you have to say, “May I please speak to ...” before talking to the person directly.
IP networking provides the concept of addressing. An IP address represents a particular computer, but no more. In order to reach the mail service on a system, or the FTP or WWW service on a system, you must have some way to further specify which service you want. In the Internet Protocol suite, this is done with port numbers, which represent the services, much like an extension number used with a phone number.
Port numbers are 16-bit integers. Unix and Unix-like systems reserve ports below 1024 for “well known” services, such as SMTP, FTP, and HTTP. Numbers 1024 and above may be used by any application, although there is no promise made that a particular port number is always available.
Two terms come up repeatedly when discussing networking: client and server. For now, we'll discuss these terms at the connection level, when first establishing connections between two processes on different systems over a network. (Once the connection is established, the higher level, or application level protocols, such as HTTP or FTP, determine who is the client and who is the server. Often, it turns out that the client and server are the same in both roles.)
The server is the system providing the service, such as the web server or email server. It is the host (system) which is connected to in a transaction. For this to work though, the server must be expecting connections. Much as there has to be someone at the office building to answer the phone2, the server process (usually) has to be started first and be waiting for a connection.
The client is the system requesting the service. It is the system initiating the connection in a transaction. (Just as when you pick up the phone to call an office or store.)
In the TCP/IP framework, each end of a connection is represented by a pair of (address, port) pairs. For the duration of the connection, the ports in use at each end are unique, and cannot be used simultaneously by other processes on the same system. (Only after closing a connection can a new one be built up on the same port. This is contrary to the usual behavior of fully developed web servers which have to avoid situations in which they are not reachable. We have to pay this price in order to enjoy the benefits of a simple communication paradigm in gawk.)
Furthermore, once the connection is established, communications are synchronous.3 I.e., each end waits on the other to finish transmitting, before replying. This is much like two people in a phone conversation. While both could talk simultaneously, doing so usually doesn't work too well.
In the case of TCP, the synchronicity is enforced by the protocol when sending data. Data writes block until the data have been received on the other end. For both TCP and UDP, data reads block until there is incoming data waiting to be read. This is summarized in the following table, where an “X” indicates that the given action blocks.
TCP | X | X
|
UDP | X |
|
RAW | X |
|
The awk programming language was originally developed as a pattern-matching language for writing short programs to perform data manipulation tasks. awk's strength is the manipulation of textual data that is stored in files. It was never meant to be used for networking purposes. To exploit its features in a networking context, it's necessary to use an access mode for network connections that resembles the access of files as closely as possible.
awk is also meant to be a prototyping language. It is used to demonstrate feasibility and to play with features and user interfaces. This can be done with file-like handling of network connections. gawk trades the lack of many of the advanced features of the TCP/IP family of protocols for the convenience of simple connection handling. The advanced features are available when programming in C or Perl. In fact, the network programming in this chapter is very similar to what is described in books such as Internet Programming with Python, Advanced Perl Programming, or Web Client Programming with Perl.
However, you can do the programming here without first having to learn object-oriented ideology; underlying languages such as Tcl/Tk, Perl, Python; or all of the libraries necessary to extend these languages before they are ready for the Internet.
This chapter demonstrates how to use the TCP protocol. The other protocols are much less important for most users (UDP) or even untractable (RAW).
The `|&' operator introduced in gawk 3.1 for use in
communicating with a coprocess is described in
Two-way Communications With Another Process (GAWK: Effective AWK Programming).
It shows how to do two-way I/O to a
separate process, sending it data with print
or printf
and
reading data with getline
. If you haven't read it already, you should
detour there to do so.
gawk transparently extends the two-way I/O mechanism to simple networking through the use of special file names. When a “coprocess” that matches the special files we are about to describe is started, gawk creates the appropriate network connection, and then two-way I/O proceeds as usual.
At the C, C++, and Perl level, networking is accomplished via sockets, an Application Programming Interface (API) originally developed at the University of California at Berkeley that is now used almost universally for TCP/IP networking. Socket level programming, while fairly straightforward, requires paying attention to a number of details, as well as using binary data. It is not well-suited for use from a high-level language like awk. The special files provided in gawk hide the details from the programmer, making things much simpler and easier to use.
The special file name for network access is made up of several fields, all of which are mandatory:
/inet/protocol/localport/hostname/remoteport
The /inet/ field is, of course, constant when accessing the network. The localport and remoteport fields do not have a meaning when used with /inet/raw because “ports” only apply to TCP and UDP. So, when using /inet/raw, the port fields always have to be `0'.
This section explains the meaning of all the other fields, as well as the range of values and the defaults. All of the fields are mandatory. To let the system pick a value, or if the field doesn't apply to the protocol, specify it as `0':
Experts in network programming will notice that the usual client/server asymmetry found at the level of the socket API is not visible here. This is for the sake of simplicity of the high-level concept. If this asymmetry is necessary for your application, use another language. For gawk, it is more important to enable users to write a client program with a minimum of code. What happens when first accessing a network connection is seen in the following pseudocode:
if ((name of remote host given) && (other side accepts connection)) { rendez-vous successful; transmit with getline or print } else { if ((other side did not accept) && (localport == 0)) exit unsuccessful if (TCP) { set up a server accepting connections this means waiting for the client on the other side to connect } else ready }
The exact behavior of this algorithm depends on the values of the fields of the special file name. When in doubt, table-inet-components gives you the combinations of values and their meaning. If this table is too complicated, focus on the three lines printed in bold. All the examples in Networking With gawk, use only the patterns printed in bold letters.
protocol | local port | host name | remote port | Resulting connection-level behavior
|
---|---|---|---|---|
tcp | 0 | x | x |
Dedicated client, fails if immediately connecting to a
server on the other side fails
|
udp | 0 | x | x | Dedicated client
|
raw | 0 | x | 0 | Dedicated client, works only as root
|
tcp, udp | x | x | x |
Client, switches to dedicated server if necessary
|
tcp, udp | x | 0 | 0 |
Dedicated server
|
raw | 0 | 0 | 0 | Dedicated server, works only as root
|
tcp, udp, raw | x | x | 0 | Invalid
|
tcp, udp, raw | 0 | 0 | x | Invalid
|
tcp, udp, raw | x | 0 | x | Invalid
|
tcp, udp | 0 | 0 | 0 | Invalid
|
tcp, udp | 0 | x | 0 | Invalid
|
raw | x | 0 | 0 | Invalid
|
raw | 0 | x | x | Invalid
|
raw | x | x | x | Invalid
|
Table 2.1: /inet Special File Components
In general, TCP is the preferred mechanism to use. It is the simplest protocol to understand and to use. Use the others only if circumstances demand low-overhead.
This section develops a pair of programs (sender and receiver) that do nothing but send a timestamp from one machine to another. The sender and the receiver are implemented with each of the three protocols available and demonstrate the differences between them.
Once again, always use TCP. (Use UDP when low overhead is a necessity, and use RAW for network experimentation.) The first example is the sender program:
# Server BEGIN { print strftime() |& "/inet/tcp/8888/0/0" close("/inet/tcp/8888/0/0") }
The receiver is very simple:
# Client BEGIN { "/inet/tcp/0/localhost/8888" |& getline print $0 close("/inet/tcp/0/localhost/8888") }
TCP guarantees that the bytes arrive at the receiving end in exactly the same order that they were sent. No byte is lost (except for broken connections), doubled, or out of order. Some overhead is necessary to accomplish this, but this is the price to pay for a reliable service. It does matter which side starts first. The sender/server has to be started first, and it waits for the receiver to read a line.
The server and client programs that use UDP are almost identical to their TCP counterparts; only the protocol has changed. As before, it does matter which side starts first. The receiving side blocks and waits for the sender. In this case, the receiver/client has to be started first:
# Server BEGIN { print strftime() |& "/inet/udp/8888/0/0" close("/inet/udp/8888/0/0") }
The receiver is almost identical to the TCP receiver:
# Client BEGIN { "/inet/udp/0/localhost/8888" |& getline print $0 close("/inet/udp/0/localhost/8888") }
UDP cannot guarantee that the datagrams at the receiving end will arrive in exactly the same order they were sent. Some datagrams could be lost, some doubled, and some out of order. But no overhead is necessary to accomplish this. This unreliable behavior is good enough for tasks such as data acquisition, logging, and even stateless services like NFS.
This is an IP-level protocol. Only root
is allowed to access this
special file. It is meant to be the basis for implementing
and experimenting with transport-level protocols.4
In the most general case,
the sender has to supply the encapsulating header bytes in front of the
packet and the receiver has to strip the additional bytes from the message.
RAW receivers cannot receive packets sent with TCP or UDP because the operating system does not deliver the packets to a RAW receiver. The operating system knows about some of the protocols on top of IP and decides on its own which packet to deliver to which process. (d.c.) Therefore, the UDP receiver must be used for receiving UDP datagrams sent with the RAW sender. This is a dark corner, not only of gawk, but also of TCP/IP.
For extended experimentation with protocols, look into the approach implemented in a tool called SPAK. This tool reflects the hierarchical layering of protocols (encapsulation) in the way data streams are piped out of one program into the next one. It shows which protocol is based on which other (lower-level) protocol by looking at the command-line ordering of the program calls. Cleverly thought out, SPAK is much better than gawk's /inet for learning the meaning of each and every bit in the protocol headers.
The next example uses the RAW protocol to emulate the behavior of UDP. The sender program is the same as above, but with some additional bytes that fill the places of the UDP fields:
BEGIN { Message = "Hello world\n" SourcePort = 0 DestinationPort = 8888 MessageLength = length(Message)+8 RawService = "/inet/raw/0/localhost/0" printf("%c%c%c%c%c%c%c%c%s", SourcePort/256, SourcePort%256, DestinationPort/256, DestinationPort%256, MessageLength/256, MessageLength%256, 0, 0, Message) |& RawService fflush(RawService) close(RawService) }
Since this program tries to emulate the behavior of UDP, it checks if the RAW sender is understood by the UDP receiver but not if the RAW receiver can understand the UDP sender. In a real network, the RAW receiver is hardly of any use because it gets every IP packet that comes across the network. There are usually so many packets that gawk would be too slow for processing them. Only on a network with little traffic can the IP-level receiver program be tested. Programs for analyzing IP traffic on modem or ISDN channels should be possible.
Port numbers do not have a meaning when using /inet/raw. Their fields
have to be `0'. Only TCP and UDP use ports. Receiving data from
/inet/raw is difficult, not only because of processing speed but also
because data is usually binary and not restricted to ASCII. This
implies that line separation with RS
does not work as usual.
Let's observe a network connection at work. Type in the following program and watch the output. Within a second, it connects via TCP (/inet/tcp) to the machine it is running on (`localhost') and asks the service `daytime' on the machine what time it is:
BEGIN { "/inet/tcp/0/localhost/daytime" |& getline print $0 close("/inet/tcp/0/localhost/daytime") }
Even experienced awk users will find the second line strange in two respects:
getline
. One would rather expect to see the special file
being read like any other file (`getline <
"/inet/tcp/0/localhost/daytime")'.
The `|&' operator was introduced in gawk 3.1 in order to overcome the crucial restriction that access to files and pipes in awk is always unidirectional. It was formerly impossible to use both access modes on the same file or pipe. Instead of changing the whole concept of file access, the `|&' operator behaves exactly like the usual pipe operator except for two additions:
In the earlier example, the `|&' operator tells getline
to read a line from the special file /inet/tcp/0/localhost/daytime.
We could also have printed a line into the special file. But instead we just
read a line with the time, printed it, and closed the connection.
(While we could just let gawk close the connection by finishing
the program, in this web page
we are pedantic and always explicitly close the connections.)
It may well be that for some reason the program shown in the previous example does not run on your machine. When looking at possible reasons for this, you will learn much about typical problems that arise in network programming. First of all, your implementation of gawk may not support network access because it is a pre-3.1 version or you do not have a network interface in your machine. Perhaps your machine uses some other protocol, such as DECnet or Novell's IPX. For the rest of this chapter, we will assume you work on a Unix machine that supports TCP/IP. If the previous example program does not run on your machine, it may help to replace the name `localhost' with the name of your machine or its IP address. If it does, you could replace `localhost' with the name of another machine in your vicinity—this way, the program connects to another machine. Now you should see the date and time being printed by the program, otherwise your machine may not support the `daytime' service. Try changing the service to `chargen' or `ftp'. This way, the program connects to other services that should give you some response. If you are curious, you should have a look at your /etc/services file. It could look like this:
# /etc/services: # # Network services, Internet style # # Name Number/Protcol Alternate name # Comments echo 7/tcp echo 7/udp discard 9/tcp sink null discard 9/udp sink null daytime 13/tcp daytime 13/udp chargen 19/tcp ttytst source chargen 19/udp ttytst source ftp 21/tcp telnet 23/tcp smtp 25/tcp mail finger 79/tcp www 80/tcp http # WorldWideWeb HTTP www 80/udp # HyperText Transfer Protocol pop-2 109/tcp postoffice # POP version 2 pop-2 109/udp pop-3 110/tcp # POP version 3 pop-3 110/udp nntp 119/tcp readnews untp # USENET News irc 194/tcp # Internet Relay Chat irc 194/udp ...
Here, you find a list of services that traditional Unix machines usually support. If your GNU/Linux machine does not do so, it may be that these services are switched off in some startup script. Systems running some flavor of Microsoft Windows usually do not support these services. Nevertheless, it is possible to do networking with gawk on Microsoft Windows.5 The first column of the file gives the name of the service, and the second column gives a unique number and the protocol that one can use to connect to this service. The rest of the line is treated as a comment. You see that some services (`echo') support TCP as well as UDP.
The next program makes use of the possibility to really interact with a network service by printing something into the special file. It asks the so-called finger service if a user of the machine is logged in. When testing this program, try to change `localhost' to some other machine name in your local network:
BEGIN { NetService = "/inet/tcp/0/localhost/finger" print "name" |& NetService while ((NetService |& getline) > 0) print $0 close(NetService) }
After telling the service on the machine which user to look for,
the program repeatedly reads lines that come as a reply. When no more
lines are coming (because the service has closed the connection), the
program also closes the connection. Try replacing "
name"
with your
login name (or the name of someone else logged in). For a list
of all users currently logged in, replace name with an empty string
(""
).
The final close
command could be safely deleted from
the above script, because the operating system closes any open connection
by default when a script reaches the end of execution. In order to avoid
portability problems, it is best to always close connections explicitly.
With the Linux kernel,
for example, proper closing results in flushing of buffers. Letting
the close happen by default may result in discarding buffers.
When looking at /etc/services you may have noticed that the `daytime' service is also available with `udp'. In the earlier example, change `tcp' to `udp', and change `finger' to `daytime'. After starting the modified program, you see the expected day and time message. The program then hangs, because it waits for more lines coming from the service. However, they never come. This behavior is a consequence of the differences between TCP and UDP. When using UDP, neither party is automatically informed about the other closing the connection. Continuing to experiment this way reveals many other subtle differences between TCP and UDP. To avoid such trouble, one should always remember the advice Douglas E. Comer and David Stevens give in Volume III of their series Internetworking With TCP (page 14):
When designing client-server applications, beginners are strongly advised to use TCP because it provides reliable, connection-oriented communication. Programs only use UDP if the application protocol handles reliability, the application requires hardware broadcast or multicast, or the application cannot tolerate virtual circuit overhead.
The preceding programs behaved as clients that connect to a server somewhere on the Internet and request a particular service. Now we set up such a service to mimic the behavior of the `daytime' service. Such a server does not know in advance who is going to connect to it over the network. Therefore, we cannot insert a name for the host to connect to in our special file name.
Start the following program in one window. Notice that the service does
not have the name `daytime', but the number `8888'.
From looking at /etc/services, you know that names like `daytime'
are just mnemonics for predetermined 16-bit integers.
Only the system administrator (root
) could enter
our new service into /etc/services with an appropriate name.
Also notice that the service name has to be entered into a different field
of the special file name because we are setting up a server, not a client:
BEGIN { print strftime() |& "/inet/tcp/8888/0/0" close("/inet/tcp/8888/0/0") }
Now open another window on the same machine. Copy the client program given as the first example (see Establishing a TCP Connection) to a new file and edit it, changing the name `daytime' to `8888'. Then start the modified client. You should get a reply like this:
Sat Sep 27 19:08:16 CEST 1997
Both programs explicitly close the connection.
Now we will intentionally make a mistake to see what happens when the name
`8888' (the so-called port) is already used by another service.
Start the server
program in both windows. The first one works, but the second one
complains that it could not open the connection. Each port on a single
machine can only be used by one server program at a time. Now terminate the
server program and change the name `8888' to `echo'. After restarting it,
the server program does not run any more, and you know why: there is already
an `echo' service running on your machine. But even if this isn't true,
you would not get
your own `echo' server running on a Unix machine,
because the ports with numbers smaller
than 1024 (`echo' is at port 7) are reserved for root
.
On machines running some flavor of Microsoft Windows, there is no restriction
that reserves ports 1 to 1024 for a privileged user; hence, you can start
an `echo' server there.
Turning this short server program into something really useful is simple. Imagine a server that first reads a file name from the client through the network connection, then does something with the file and sends a result back to the client. The server-side processing could be:
BEGIN { NetService = "/inet/tcp/8888/0/0" NetService |& getline CatPipe = ("cat " $1) # sets $0 and the fields while ((CatPipe | getline) > 0) print $0 |& NetService close(NetService) }
and we would have a remote copying facility. Such a server reads the name of a file from any client that connects to it and transmits the contents of the named file across the net. The server-side processing could also be the execution of a command that is transmitted across the network. From this example, you can see how simple it is to open up a security hole on your machine. If you allow clients to connect to your machine and execute arbitrary commands, anyone would be free to do `rm -rf *'.
The distribution of email is usually done by dedicated email servers that communicate with your machine using special protocols. To receive email, we will use the Post Office Protocol (POP). Sending can be done with the much older Simple Mail Transfer Protocol (SMTP).
When you type in the following program, replace the emailhost by the name of your local email server. Ask your administrator if the server has a POP service, and then use its name or number in the program below. Now the program is ready to connect to your email server, but it will not succeed in retrieving your mail because it does not yet know your login name or password. Replace them in the program and it shows you the first email the server has in store:
BEGIN { POPService = "/inet/tcp/0/emailhost/pop3" RS = ORS = "\r\n" print "user name" |& POPService POPService |& getline print "pass password" |& POPService POPService |& getline print "retr 1" |& POPService POPService |& getline if ($1 != "+OK") exit print "quit" |& POPService RS = "\r\n\\.\r\n" POPService |& getline print $0 close(POPService) }
The record separators RS
and ORS
are redefined because the
protocol (POP) requires CR-LF to separate lines. After identifying
yourself to the email service, the command `retr 1' instructs the
service to send the first of all your email messages in line. If the service
replies with something other than `+OK', the program exits; maybe there
is no email. Otherwise, the program first announces that it intends to finish
reading email, and then redefines RS
in order to read the entire
email as multiline input in one record. From the POP RFC, we know that the body
of the email always ends with a single line containing a single dot.
The program looks for this using `RS = "\r\n\\.\r\n"'.
When it finds this sequence in the mail message, it quits.
You can invoke this program as often as you like; it does not delete the
message it reads, but instead leaves it on the server.
Retrieving a web page from a web server is as simple as retrieving email from an email server. We only have to use a similar, but not identical, protocol and a different port. The name of the protocol is HyperText Transfer Protocol (HTTP) and the port number is usually 80. As in the preceding section, ask your administrator about the name of your local web server or proxy web server and its port number for HTTP requests.
The following program employs a rather crude approach toward retrieving a web page. It uses the prehistoric syntax of HTTP 0.9, which almost all web servers still support. The most noticeable thing about it is that the program directs the request to the local proxy server whose name you insert in the special file name (which in turn calls `www.yahoo.com'):
BEGIN { RS = ORS = "\r\n" HttpService = "/inet/tcp/0/proxy/80" print "GET http://www.yahoo.com" |& HttpService while ((HttpService |& getline) > 0) print $0 close(HttpService) }
Again, lines are separated by a redefined RS
and ORS
.
The GET
request that we send to the server is the only kind of
HTTP request that existed when the web was created in the early 1990s.
HTTP calls this GET
request a “method,” which tells the
service to transmit a web page (here the home page of the Yahoo! search
engine). Version 1.0 added the request methods HEAD
and
POST
. The current version of HTTP is 1.1,6 and knows the additional request
methods OPTIONS
, PUT
, DELETE
, and TRACE
.
You can fill in any valid web address, and the program prints the
HTML code of that page to your screen.
Notice the similarity between the responses of the POP and HTTP services. First, you get a header that is terminated by an empty line, and then you get the body of the page in HTML. The lines of the headers also have the same form as in POP. There is the name of a parameter, then a colon, and finally the value of that parameter.
Images (.png or .gif files) can also be retrieved this way, but then you get binary data that should be redirected into a file. Another application is calling a CGI (Common Gateway Interface) script on some server. CGI scripts are used when the contents of a web page are not constant, but generated instantly at the moment you send a request for the page. For example, to get a detailed report about the current quotes of Motorola stock shares, call a CGI script at Yahoo! with the following:
get = "GET http://quote.yahoo.com/q?s=MOT&d=t" print get |& HttpService
You can also request weather reports this way.
Now we know enough about HTTP to set up a primitive web service that just
says "Hello, world"
when someone connects to it with a browser.
Compared
to the situation in the preceding section, our program changes the role. It
tries to behave just like the server we have observed. Since we are setting
up a server here, we have to insert the port number in the `localport'
field of the special file name. The other two fields (hostname and
remoteport) have to contain a `0' because we do not know in
advance which host will connect to our service.
In the early 1990s, all a server had to do was send an HTML document and close the connection. Here, we adhere to the modern syntax of HTTP. The steps are as follows:
"Hello, world"
body
in HTML.
The useless while
loop swallows the request of the browser.
We could actually omit the loop, and on most machines the program would still
work.
First, start the following program:
BEGIN { RS = ORS = "\r\n" HttpService = "/inet/tcp/8080/0/0" Hello = "<HTML><HEAD>" \ "<TITLE>A Famous Greeting</TITLE></HEAD>" \ "<BODY><H1>Hello, world</H1></BODY></HTML>" Len = length(Hello) + length(ORS) print "HTTP/1.0 200 OK" |& HttpService print "Content-Length: " Len ORS |& HttpService print Hello |& HttpService while ((HttpService |& getline) > 0) continue; close(HttpService) }
Now, on the same machine, start your favorite browser and let it point to http://localhost:8080 (the browser needs to know on which port our server is listening for requests). If this does not work, the browser probably tries to connect to a proxy server that does not know your machine. If so, change the browser's configuration so that the browser does not try to use a proxy to connect to your machine.
Setting up a web service that allows user interaction is more difficult and
shows us the limits of network access in gawk. In this section,
we develop a main program (a BEGIN
pattern and its action)
that will become the core of event-driven execution controlled by a
graphical user interface (GUI).
Each HTTP event that the user triggers by some action within the browser
is received in this central procedure. Parameters and menu choices are
extracted from this request, and an appropriate measure is taken according to
the user's choice.
For example:
BEGIN { if (MyHost == "") { "uname -n" | getline MyHost close("uname -n") } if (MyPort == 0) MyPort = 8080 HttpService = "/inet/tcp/" MyPort "/0/0" MyPrefix = "http://" MyHost ":" MyPort SetUpServer() while ("awk" != "complex") { # header lines are terminated this way RS = ORS = "\r\n" Status = 200 # this means OK Reason = "OK" Header = TopHeader Document = TopDoc Footer = TopFooter if (GETARG["Method"] == "GET") { HandleGET() } else if (GETARG["Method"] == "HEAD") { # not yet implemented } else if (GETARG["Method"] != "") { print "bad method", GETARG["Method"] } Prompt = Header Document Footer print "HTTP/1.0", Status, Reason |& HttpService print "Connection: Close" |& HttpService print "Pragma: no-cache" |& HttpService len = length(Prompt) + length(ORS) print "Content-length:", len |& HttpService print ORS Prompt |& HttpService # ignore all the header lines while ((HttpService |& getline) > 0) ; # stop talking to this client close(HttpService) # wait for new client request HttpService |& getline # do some logging print systime(), strftime(), $0 # read request parameters CGI_setup($1, $2, $3) } }
This web server presents menu choices in the form of HTML links. Therefore, it has to tell the browser the name of the host it is residing on. When starting the server, the user may supply the name of the host from the command line with `gawk -v MyHost="Rumpelstilzchen"'. If the user does not do this, the server looks up the name of the host it is running on for later use as a web address in HTML documents. The same applies to the port number. These values are inserted later into the HTML content of the web pages to refer to the home system.
Each server that is built around this core has to initialize some
application-dependent variables (such as the default home page) in a procedure
SetUpServer
, which is called immediately before entering the
infinite loop of the server. For now, we will write an instance that
initiates a trivial interaction. With this home page, the client user
can click on two possible choices, and receive the current date either
in human-readable format or in seconds since 1970:
function SetUpServer() { TopHeader = "<HTML><HEAD>" TopHeader = TopHeader \ "<title>My name is GAWK, GNU AWK</title></HEAD>" TopDoc = "<BODY><h2>\ Do you prefer your date <A HREF=" MyPrefix \ "/human>human</A> or \ <A HREF=" MyPrefix "/POSIX>POSIXed</A>?</h2>" ORS ORS TopFooter = "</BODY></HTML>" }
On the first run through the main loop, the default line terminators are
set and the default home page is copied to the actual home page. Since this
is the first run, GETARG["Method"]
is not initialized yet, hence the
case selection over the method does nothing. Now that the home page is
initialized, the server can start communicating to a client browser.
It does so by printing the HTTP header into the network connection (`print ... |& HttpService'). This command blocks execution of the server script until a client connects. If this server script is compared with the primitive one we wrote before, you will notice two additional lines in the header. The first instructs the browser to close the connection after each request. The second tells the browser that it should never try to remember earlier requests that had identical web addresses (no caching). Otherwise, it could happen that the browser retrieves the time of day in the previous example just once, and later it takes the web page from the cache, always displaying the same time of day although time advances each second.
Having supplied the initial home page to the browser with a valid document
stored in the parameter Prompt
, it closes the connection and waits
for the next request. When the request comes, a log line is printed that
allows us to see which request the server receives. The final step in the
loop is to call the function CGI_setup
, which reads all the lines
of the request (coming from the browser), processes them, and stores the
transmitted parameters in the array PARAM
. The complete
text of these application-independent functions can be found in
A Simple CGI Library.
For now, we use a simplified version of CGI_setup
:
function CGI_setup( method, uri, version, i) { delete GETARG; delete MENU; delete PARAM GETARG["Method"] = $1 GETARG["URI"] = $2 GETARG["Version"] = $3 i = index($2, "?") # is there a "?" indicating a CGI request? if (i > 0) { split(substr($2, 1, i-1), MENU, "[/:]") split(substr($2, i+1), PARAM, "&") for (i in PARAM) { j = index(PARAM[i], "=") GETARG[substr(PARAM[i], 1, j-1)] = \ substr(PARAM[i], j+1) } } else { # there is no "?", no need for splitting PARAMs split($2, MENU, "[/:]") } }
At first, the function clears all variables used for
global storage of request parameters. The rest of the function serves
the purpose of filling the global parameters with the extracted new values.
To accomplish this, the name of the requested resource is split into
parts and stored for later evaluation. If the request contains a `?',
then the request has CGI variables seamlessly appended to the web address.
Everything in front of the `?' is split up into menu items, and
everything behind the `?' is a list of `variable=value' pairs
(separated by `&') that also need splitting. This way, CGI variables are
isolated and stored. This procedure lacks recognition of special characters
that are transmitted in coded form7. Here, any
optional request header and body parts are ignored. We do not need
header parameters and the request body. However, when refining our approach or
working with the POST
and PUT
methods, reading the header
and body
becomes inevitable. Header parameters should then be stored in a global
array as well as the body.
On each subsequent run through the main loop, one request from a browser is
received, evaluated, and answered according to the user's choice. This can be
done by letting the value of the HTTP method guide the main loop into
execution of the procedure HandleGET
, which evaluates the user's
choice. In this case, we have only one hierarchical level of menus,
but in the general case,
menus are nested.
The menu choices at each level are
separated by `/', just as in file names. Notice how simple it is to
construct menus of arbitrary depth:
function HandleGET() { if ( MENU[2] == "human") { Footer = strftime() TopFooter } else if (MENU[2] == "POSIX") { Footer = systime() TopFooter } }
The disadvantage of this approach is that our server is slow and can
handle only one request at a time. Its main advantage, however, is that
the server
consists of just one gawk program. No need for installing an
httpd, and no need for static separate HTML files, CGI scripts, or
root
privileges. This is rapid prototyping.
This program can be started on the same host that runs your browser.
Then let your browser point to http://localhost:8080.
It is also possible to include images into the HTML pages.
Most browsers support the not very well-known
.xbm format,
which may contain only
monochrome pictures but is an ASCII format. Binary images are possible but
not so easy to handle. Another way of including images is to generate them
with a tool such as GNUPlot,
by calling the tool with the system
function or through a pipe.
HTTP is like being married: you have to be able to handle whatever you're given, while being very careful what you send back.
Phil Smith III,
http://www.netfunny.com/rhf/jokes/99/Mar/http.html
In A Web Service with Interaction,
we saw the function CGI_setup
as part of the web server
“core logic” framework. The code presented there handles almost
everything necessary for CGI requests.
One thing it doesn't do is handle encoded characters in the requests.
For example, an `&' is encoded as a percent sign followed by
the hexadecimal value: `%26'. These encoded values should be
decoded.
Following is a simple library to perform these tasks.
This code is used for all web server examples
used throughout the rest of this web page.
If you want to use it for your own web server, store the source code
into a file named inetlib.awk. Then you can include
these functions into your code by placing the following statement
into your program
(on the first line of your script):
@include inetlib.awk
But beware, this mechanism is only possible if you invoke your web server script with igawk instead of the usual awk or gawk. Here is the code:
# CGI Library and core of a web server # Global arrays # GETARG --- arguments to CGI GET command # MENU --- menu items (path names) # PARAM --- parameters of form x=y # Optional variable MyHost contains host address # Optional variable MyPort contains port number # Needs TopHeader, TopDoc, TopFooter # Sets MyPrefix, HttpService, Status, Reason BEGIN { if (MyHost == "") { "uname -n" | getline MyHost close("uname -n") } if (MyPort == 0) MyPort = 8080 HttpService = "/inet/tcp/" MyPort "/0/0" MyPrefix = "http://" MyHost ":" MyPort SetUpServer() while ("awk" != "complex") { # header lines are terminated this way RS = ORS = "\r\n" Status = 200 # this means OK Reason = "OK" Header = TopHeader Document = TopDoc Footer = TopFooter if (GETARG["Method"] == "GET") { HandleGET() } else if (GETARG["Method"] == "HEAD") { # not yet implemented } else if (GETARG["Method"] != "") { print "bad method", GETARG["Method"] } Prompt = Header Document Footer print "HTTP/1.0", Status, Reason |& HttpService print "Connection: Close" |& HttpService print "Pragma: no-cache" |& HttpService len = length(Prompt) + length(ORS) print "Content-length:", len |& HttpService print ORS Prompt |& HttpService # ignore all the header lines while ((HttpService |& getline) > 0) continue # stop talking to this client close(HttpService) # wait for new client request HttpService |& getline # do some logging print systime(), strftime(), $0 CGI_setup($1, $2, $3) } } function CGI_setup( method, uri, version, i) { delete GETARG delete MENU delete PARAM GETARG["Method"] = method GETARG["URI"] = uri GETARG["Version"] = version i = index(uri, "?") if (i > 0) { # is there a "?" indicating a CGI request? split(substr(uri, 1, i-1), MENU, "[/:]") split(substr(uri, i+1), PARAM, "&") for (i in PARAM) { PARAM[i] = _CGI_decode(PARAM[i]) j = index(PARAM[i], "=") GETARG[substr(PARAM[i], 1, j-1)] = \ substr(PARAM[i], j+1) } } else { # there is no "?", no need for splitting PARAMs split(uri, MENU, "[/:]") } for (i in MENU) # decode characters in path if (i > 4) # but not those in host name MENU[i] = _CGI_decode(MENU[i]) }
This isolates details in a single function, CGI_setup
.
Decoding of encoded characters is pushed off to a helper function,
_CGI_decode
. The use of the leading underscore (`_') in
the function name is intended to indicate that it is an “internal”
function, although there is nothing to enforce this:
function _CGI_decode(str, hexdigs, i, pre, code1, code2, val, result) { hexdigs = "123456789abcdef" i = index(str, "%") if (i == 0) # no work to do return str do { pre = substr(str, 1, i-1) # part before %xx code1 = substr(str, i+1, 1) # first hex digit code2 = substr(str, i+2, 1) # second hex digit str = substr(str, i+3) # rest of string code1 = tolower(code1) code2 = tolower(code2) val = index(hexdigs, code1) * 16 \ + index(hexdigs, code2) result = result pre sprintf("%c", val) i = index(str, "%") } while (i != 0) if (length(str) > 0) result = result str return result }
This works by splitting the string apart around an encoded character.
The two digits are converted to lowercase characters and looked up in a string
of hex digits. Note that 0
is not in the string on purpose;
index
returns zero when it's not found, automatically giving
the correct value! Once the hexadecimal value is converted from
characters in a string into a numerical value, sprintf
converts the value back into a real character.
The following is a simple test harness for the above functions:
BEGIN { CGI_setup("GET", "http://www.gnu.org/cgi-bin/foo?p1=stuff&p2=stuff%26junk" \ "&percent=a %25 sign", "1.0") for (i in MENU) printf "MENU[\"%s\"] = %s\n", i, MENU[i] for (i in PARAM) printf "PARAM[\"%s\"] = %s\n", i, PARAM[i] for (i in GETARG) printf "GETARG[\"%s\"] = %s\n", i, GETARG[i] }
And this is the result when we run it:
$ gawk -f testserv.awk -| MENU["4"] = www.gnu.org -| MENU["5"] = cgi-bin -| MENU["6"] = foo -| MENU["1"] = http -| MENU["2"] = -| MENU["3"] = -| PARAM["1"] = p1=stuff -| PARAM["2"] = p2=stuff&junk -| PARAM["3"] = percent=a % sign -| GETARG["p1"] = stuff -| GETARG["percent"] = a % sign -| GETARG["p2"] = stuff&junk -| GETARG["Method"] = GET -| GETARG["Version"] = 1.0 -| GETARG["URI"] = http://www.gnu.org/cgi-bin/foo?p1=stuff& p2=stuff%26junk&percent=a %25 sign
In the preceding section, we built the core logic for event-driven GUIs. In this section, we finally extend the core to a real application. No one would actually write a commercial web server in gawk, but it is instructive to see that it is feasible in principle.
The application is ELIZA, the famous program by Joseph Weizenbaum that mimics the behavior of a professional psychotherapist when talking to you. Weizenbaum would certainly object to this description, but this is part of the legend around ELIZA. Take the site-independent core logic and append the following code:
function SetUpServer() { SetUpEliza() TopHeader = \ "<HTML><title>An HTTP-based System with GAWK</title>\ <HEAD><META HTTP-EQUIV=\"Content-Type\"\ CONTENT=\"text/html; charset=iso-8859-1\"></HEAD>\ <BODY BGCOLOR=\"#ffffff\" TEXT=\"#000000\"\ LINK=\"#0000ff\" VLINK=\"#0000ff\"\ ALINK=\"#0000ff\"> <A NAME=\"top\">" TopDoc = "\ <h2>Please choose one of the following actions:</h2>\ <UL>\ <LI>\ <A HREF=" MyPrefix "/AboutServer>About this server</A>\ </LI><LI>\ <A HREF=" MyPrefix "/AboutELIZA>About Eliza</A></LI>\ <LI>\ <A HREF=" MyPrefix \ "/StartELIZA>Start talking to Eliza</A></LI></UL>" TopFooter = "</BODY></HTML>" }
SetUpServer
is similar to the previous example,
except for calling another function, SetUpEliza
.
This approach can be used to implement other kinds of servers.
The only changes needed to do so are hidden in the functions
SetUpServer
and HandleGET
. Perhaps it might be necessary to
implement other HTTP methods.
The igawk program that comes with gawk
may be useful for this process.
When extending this example to a complete application, the first
thing to do is to implement the function SetUpServer
to
initialize the HTML pages and some variables. These initializations
determine the way your HTML pages look (colors, titles, menu
items, etc.).
The function HandleGET
is a nested case selection that decides
which page the user wants to see next. Each nesting level refers to a menu
level of the GUI. Each case implements a certain action of the menu. On the
deepest level of case selection, the handler essentially knows what the
user wants and stores the answer into the variable that holds the HTML
page contents:
function HandleGET() { # A real HTTP server would treat some parts of the URI as a file name. # We take parts of the URI as menu choices and go on accordingly. if(MENU[2] == "AboutServer") { Document = "This is not a CGI script.\ This is an httpd, an HTML file, and a CGI script all \ in one GAWK script. It needs no separate www-server, \ no installation, and no root privileges.\ <p>To run it, do this:</p><ul>\ <li> start this script with \"gawk -f httpserver.awk\",</li>\ <li> and on the same host let your www browser open location\ \"http://localhost:8080\"</li>\ </ul>\<p>\ Details of HTTP come from:</p><ul>\ <li>Hethmon: Illustrated Guide to HTTP</p>\ <li>RFC 2068</li></ul><p>JK 14.9.1997</p>" } else if (MENU[2] == "AboutELIZA") { Document = "This is an implementation of the famous ELIZA\ program by Joseph Weizenbaum. It is written in GAWK and\ /bin/sh: expad: command not found } else if (MENU[2] == "StartELIZA") { gsub(/\+/, " ", GETARG["YouSay"]) # Here we also have to substitute coded special characters Document = "<form method=GET>" \ "<h3>" ElizaSays(GETARG["YouSay"]) "</h3>\ <p><input type=text name=YouSay value=\"\" size=60>\ <br><input type=submit value=\"Tell her about it\"></p></form>" } }
Now we are down to the heart of ELIZA, so you can see how it works. Initially the user does not say anything; then ELIZA resets its money counter and asks the user to tell what comes to mind open heartedly. The subsequent answers are converted to uppercase characters and stored for later comparison. ELIZA presents the bill when being confronted with a sentence that contains the phrase “shut up.” Otherwise, it looks for keywords in the sentence, conjugates the rest of the sentence, remembers the keyword for later use, and finally selects an answer from the set of possible answers:
function ElizaSays(YouSay) { if (YouSay == "") { cost = 0 answer = "HI, IM ELIZA, TELL ME YOUR PROBLEM" } else { q = toupper(YouSay) gsub("'", "", q) if(q == qold) { answer = "PLEASE DONT REPEAT YOURSELF !" } else { if (index(q, "SHUT UP") > 0) { answer = "WELL, PLEASE PAY YOUR BILL. ITS EXACTLY ... $"\ int(100*rand()+30+cost/100) } else { qold = q w = "-" # no keyword recognized yet for (i in k) { # search for keywords if (index(q, i) > 0) { w = i break } } if (w == "-") { # no keyword, take old subject w = wold subj = subjold } else { # find subject subj = substr(q, index(q, w) + length(w)+1) wold = w subjold = subj # remember keyword and subject } for (i in conj) gsub(i, conj[i], q) # conjugation # from all answers to this keyword, select one randomly answer = r[indices[int(split(k[w], indices) * rand()) + 1]] # insert subject into answer gsub("_", subj, answer) } } } cost += length(answer) # for later payment : 1 cent per character return answer }
In the long but simple function SetUpEliza
, you can see tables
for conjugation, keywords, and answers.8 The associative array k
contains indices into the array of answers r
. To choose an
answer, ELIZA just picks an index randomly:
function SetUpEliza() { srand() wold = "-" subjold = " " # table for conjugation conj[" ARE " ] = " AM " conj["WERE " ] = "WAS " conj[" YOU " ] = " I " conj["YOUR " ] = "MY " conj[" IVE " ] =\ conj[" I HAVE " ] = " YOU HAVE " conj[" YOUVE " ] =\ conj[" YOU HAVE "] = " I HAVE " conj[" IM " ] =\ conj[" I AM " ] = " YOU ARE " conj[" YOURE " ] =\ conj[" YOU ARE " ] = " I AM " # table of all answers r[1] = "DONT YOU BELIEVE THAT I CAN _" r[2] = "PERHAPS YOU WOULD LIKE TO BE ABLE TO _ ?" ...
# table for looking up answers that # fit to a certain keyword k["CAN YOU"] = "1 2 3" k["CAN I"] = "4 5" k["YOU ARE"] =\ k["YOURE"] = "6 7 8 9" ...
}
Some interesting remarks and details (including the original source code of ELIZA) are found on Mark Humphrys' home page. Yahoo! also has a page with a collection of ELIZA-like programs. Many of them are written in Java, some of them disclosing the Java source code, and a few even explain how to modify the Java source code.
By now it should be clear that debugging a networked application is more complicated than debugging a single-process single-hosted application. The behavior of a networked application sometimes looks noncausal because it is not reproducible in a strong sense. Whether a network application works or not sometimes depends on the following:
The most difficult problems for a beginner arise from the hidden states of the underlying network. After closing a TCP connection, it's often necessary to wait a short while before reopening the connection. Even more difficult is the establishment of a connection that previously ended with a “broken pipe.” Those connections have to “time out” for a minute or so before they can reopen. Check this with the command `netstat -a', which provides a list of still “active” connections.
Now, you have learned enough to build your own application. You could, for example, take part in the Loebner Contest to win $100,000. The Loebner Prize is the first formal instantiation of a Turing Test. Hugh Loebner agreed with The Cambridge Center for Behavioral Studies to underwrite a contest designed to implement the Turing Test. Dr. Loebner pledged a Grand Prize of $100,000 for the first computer whose responses were indistinguishable from a human's. Each year an annual prize of $2000 and a bronze medal is awarded to the most human computer. The winner of the annual contest is the best entry relative to other entries that year, irrespective of how good it is in an absolute sense. Here is an example of a conversation with the winning program of 1997:
(c)1997 Cambridge Center For Behavioral Studies all rights reserved [CONVERSE] [Intelligent Research Ltd.] Start at: [1997/04/29 08:59:40] PROGRAM[10:39:20]Hi, my name is Catherine, what's yours? JUDGE02[10:39:36]My name is Nathan. PROGRAM[10:39:37]Well, it's nice to meet you, Nathan. PROGRAM[10:39:45]Did you see that story on CNN last night about the lesbian PROGRAM[10:40:03]couple who came out at a White House party on Sunday? JUDGE02[10:40:45]No. I'm sorry I missed that. How did the Prez take it? PROGRAM[10:40:47]Ellen Degeneres was one of them - she was kissing her lover PROGRAM[10:41:08]in front of Bill Clinton. Do you think he was very PROGRAM[10:41:21]embarrassed? JUDGE02[10:41:37]You tell me. I didn't see it. PROGRAM[10:41:38]Are you still a Friend of Bill Clinton? JUDGE02[10:42:22]Yes. I would like to talk about something else. Do you know anything about sculpture. PROGRAM[10:42:24]Well, I suppose he's doing his best like most of us, but he PROGRAM[10:42:35]does seem to attract an UNUSUAL amount of bad publicity, PROGRAM[10:42:51]wouldnt you say--can it all be bad luck? JUDGE02[10:43:20]I asked you if you knew anything about sculpture. PROGRAM[10:43:21]OK, but what happens now--does it all drift on, with PROGRAM[10:43:36]everyone waiting to see how much his friends have said about PROGRAM[10:43:47]him under threat of lots and lots of jail-or will something PROGRAM[10:44:01]dramatic actually happen? JUDGE02[10:44:19]Do you know what sculpture is? PROGRAM[10:44:20]Well, youre more a fan of his than I am I guess---though I PROGRAM[10:44:34]cant SWEAR what Id have done in that locked hotel room, I PROGRAM[10:44:51]must say. JUDGE02[10:45:26]Have you ever been to the Salmagundi Club? PROGRAM[10:45:29]Never. to go back to the original discussion Time to get PROGRAM[10:45:43]off this one I think and onto something more down to earth! JUDGE02[10:46:20]What is more down to earth than art? PROGRAM[10:46:21]I don't know what -- to be honest. - PROGRAM[10:46:30]I suppose it depends on where you're coming from, but as the PROGRAM[10:46:46]song goes in My Fair Lady, "Why can't a woman be more like a PROGRAM[10:47:03]man? " JUDGE02[10:47:52]I liked that song but I prefer "Why can't children be more like we are" JUDGE02[10:48:10]from another play the name of which I cannot remember. PROGRAM[10:48:12]What, if anything, do you enjoy about being a man? JUDGE02[10:49:01]I would enjoy all aspects of life no matter what my gender. PROGRAM[10:49:02]Do you think of yourself as being attractive?
This program insists on always speaking about the same story around Bill Clinton. You see, even a program with a rather narrow mind can behave so much like a human being that it can win this prize. It is quite common to let these programs talk to each other via network connections. But during the competition itself, the program and its computer have to be present at the place the competition is held. We all would love to see a gawk program win in such an event. Maybe it is up to you to accomplish this?
Some other ideas for useful networked applications:
The GAWK manual can be consumed in a single lab session and the language can be mastered by the next morning by the average student. GAWK's automatic initialization, implicit coercion, I/O support and lack of pointers forgive many of the mistakes that young programmers are likely to make. Those who have seen C but not mastered it are happy to see that GAWK retains some of the same sensibilities while adding what must be regarded as spoonsful of syntactic sugar.
...
There are further simple answers. Probably the best is the fact that increasingly, undergraduate AI programming is involving the Web. Oren Etzioni (University of Washington, Seattle) has for a while been arguing that the “softbot” is replacing the mechanical engineers' robot as the most glamorous AI testbed. If the artifact whose behavior needs to be controlled in an intelligent way is the software agent, then a language that is well-suited to controlling the software environment is the appropriate language. That would imply a scripting language. If the robot is KAREL, then the right language is “turn left; turn right.” If the robot is Netscape, then the right language is something that can generate `netscape -remote 'openURL(http://cs.wustl.edu/~loui)'' with elan.
...
AI programming requires high-level thinking. There have always been a few gifted programmers who can write high-level programs in assembly language. Most however need the ambient abstraction to have a higher floor.
...
Second, inference is merely the expansion of notation. No matter whether the logic that underlies an AI program is fuzzy, probabilistic, deontic, defeasible, or deductive, the logic merely defines how strings can be transformed into other strings. A language that provides the best support for string processing in the end provides the best support for logic, for the exploration of various logics, and for most forms of symbolic processing that AI might choose to call “reasoning” instead of “logic.” The implication is that PROLOG, which saves the AI programmer from having to write a unifier, saves perhaps two dozen lines of GAWK code at the expense of strongly biasing the logic and representational expressiveness of any approach.
Now that gawk itself can connect to the Internet, it should be obvious that it is suitable for writing intelligent web agents.
In this chapter, we look at a number of self-contained scripts, with an emphasis on concise networking. Along the way, we work towards creating building blocks that encapsulate often needed functions of the networking world, show new techniques that broaden the scope of problems that can be solved with gawk, and explore leading edge technology that may shape the future of networking.
We often refer to the site-independent core of the server that
we built in
A Simple Web Server.
When building new and nontrivial servers, we
always copy this building block and append new instances of the two
functions SetUpServer
and HandleGET
.
This makes a lot of sense, since this scheme of event-driven execution provides gawk with an interface to the most widely accepted standard for GUIs: the web browser. Now, gawk can rival even Tcl/Tk.
Tcl and gawk have much in common. Both are simple scripting languages that allow us to quickly solve problems with short programs. But Tcl has Tk on top of it, and gawk had nothing comparable up to now. While Tcl needs a large and ever-changing library (Tk, which was bound to the X Window System until recently), gawk needs just the networking interface and some kind of browser on the client's side. Besides better portability, the most important advantage of this approach (embracing well-established standards such HTTP and HTML) is that we do not need to change the language. We let others do the work of fighting over protocols and standards. We can use HTML, JavaScript, VRML, or whatever else comes along to do our work.
At first glance, the "Hello, world"
example in
A Primitive Web Service,
seems useless. By adding just a few lines, we can turn it into something useful.
The PANIC program tells everyone who connects that the local site is not working. When a web server breaks down, it makes a difference if customers get a strange “network unreachable” message, or a short message telling them that the server has a problem. In such an emergency, the hard disk and everything on it (including the regular web service) may be unavailable. Rebooting the web server off a diskette makes sense in this setting.
To use the PANIC program as an emergency web server, all you need are the gawk executable and the program below on a diskette. By default, it connects to port 8080. A different value may be supplied on the command line:
BEGIN { RS = ORS = "\r\n" if (MyPort == 0) MyPort = 8080 HttpService = "/inet/tcp/" MyPort "/0/0" Hello = "<HTML><HEAD><TITLE>Out Of Service</TITLE>" \ "</HEAD><BODY><H1>" \ "This site is temporarily out of service." \ "</H1></BODY></HTML>" Len = length(Hello) + length(ORS) while ("awk" != "complex") { print "HTTP/1.0 200 OK" |& HttpService print "Content-Length: " Len ORS |& HttpService print Hello |& HttpService while ((HttpService |& getline) > 0) continue; close(HttpService) } }
GETURL is a versatile building block for shell scripts that need to retrieve files from the Internet. It takes a web address as a command-line parameter and tries to retrieve the contents of this address. The contents are printed to standard output, while the header is printed to /dev/stderr. A surrounding shell script could analyze the contents and extract the text or the links. An ASCII browser could be written around GETURL. But more interestingly, web robots are straightforward to write on top of GETURL. On the Internet, you can find several programs of the same name that do the same job. They are usually much more complex internally and at least 10 times longer.
At first, GETURL checks if it was called with exactly one web address.
Then, it checks if the user chose to use a special proxy server whose name
is handed over in a variable. By default, it is assumed that the local
machine serves as proxy. GETURL uses the GET
method by default
to access the web page. By handing over the name of a different method
(such as HEAD
), it is possible to choose a different behavior. With
the HEAD
method, the user does not receive the body of the page
content, but does receive the header:
BEGIN { if (ARGC != 2) { print "GETURL - retrieve Web page via HTTP 1.0" print "IN:\n the URL as a command-line parameter" print "PARAM(S):\n -v Proxy=MyProxy" print "OUT:\n the page content on stdout" print " the page header on stderr" print "JK 16.05.1997" print "ADR 13.08.2000" exit } URL = ARGV[1]; ARGV[1] = "" if (Proxy == "") Proxy = "127.0.0.1" if (ProxyPort == 0) ProxyPort = 80 if (Method == "") Method = "GET" HttpService = "/inet/tcp/0/" Proxy "/" ProxyPort ORS = RS = "\r\n\r\n" print Method " " URL " HTTP/1.0" |& HttpService HttpService |& getline Header print Header > "/dev/stderr" while ((HttpService |& getline) > 0) printf "%s", $0 close(HttpService) }
This program can be changed as needed, but be careful with the last lines.
Make sure transmission of binary data is not corrupted by additional line
breaks. Even as it is now, the byte sequence "\r\n\r\n"
would
disappear if it were contained in binary data. Don't get caught in a
trap when trying a quick fix on this one.
Today, you often find powerful processors in embedded systems. Dedicated network routers and controllers for all kinds of machinery are examples of embedded systems. Processors like the Intel 80x86 or the AMD Elan are able to run multitasking operating systems, such as XINU or GNU/Linux in embedded PCs. These systems are small and usually do not have a keyboard or a display. Therefore it is difficult to set up their configuration. There are several widespread ways to set them up:
In this section, we look at a solution that uses HTTP connections
to control variables of an embedded system that are stored in a file.
Since embedded systems have tight limits on resources like memory,
it is difficult to employ advanced techniques such as SNMP and HTTP
servers. gawk fits in quite nicely with its single executable
which needs just a short script to start working.
The following program stores the variables in a file, and a concurrent
process in the embedded system may read the file. The program uses the
site-independent part of the simple web server that we developed in
A Web Service with Interaction.
As mentioned there, all we have to do is to write two new procedures
SetUpServer
and HandleGET
:
function SetUpServer() { TopHeader = "<HTML><title>Remote Configuration</title>" TopDoc = "<BODY>\ <h2>Please choose one of the following actions:</h2>\ <UL>\ <LI><A HREF=" MyPrefix "/AboutServer>About this server</A></LI>\ <LI><A HREF=" MyPrefix "/ReadConfig>Read Configuration</A></LI>\ <LI><A HREF=" MyPrefix "/CheckConfig>Check Configuration</A></LI>\ <LI><A HREF=" MyPrefix "/ChangeConfig>Change Configuration</A></LI>\ <LI><A HREF=" MyPrefix "/SaveConfig>Save Configuration</A></LI>\ </UL>" TopFooter = "</BODY></HTML>" if (ConfigFile == "") ConfigFile = "config.asc" }
The function SetUpServer
initializes the top level HTML texts
as usual. It also initializes the name of the file that contains the
configuration parameters and their values. In case the user supplies
a name from the command line, that name is used. The file is expected to
contain one parameter per line, with the name of the parameter in
column one and the value in column two.
The function HandleGET
reflects the structure of the menu
tree as usual. The first menu choice tells the user what this is all
about. The second choice reads the configuration file line by line
and stores the parameters and their values. Notice that the record
separator for this file is "\n"
, in contrast to the record separator
for HTTP. The third menu choice builds an HTML table to show
the contents of the configuration file just read. The fourth choice
does the real work of changing parameters, and the last one just saves
the configuration into a file:
function HandleGET() { if(MENU[2] == "AboutServer") { Document = "This is a GUI for remote configuration of an\ embedded system. It is is implemented as one GAWK script." } else if (MENU[2] == "ReadConfig") { RS = "\n" while ((getline < ConfigFile) > 0) config[$1] = $2; close(ConfigFile) RS = "\r\n" Document = "Configuration has been read." } else if (MENU[2] == "CheckConfig") { Document = "<TABLE BORDER=1 CELLPADDING=5>" for (i in config) Document = Document "<TR><TD>" i "</TD>" \ "<TD>" config[i] "</TD></TR>" Document = Document "</TABLE>" } else if (MENU[2] == "ChangeConfig") { if ("Param" in GETARG) { # any parameter to set? if (GETARG["Param"] in config) { # is parameter valid? config[GETARG["Param"]] = GETARG["Value"] Document = (GETARG["Param"] " = " GETARG["Value"] ".") } else { Document = "Parameter <b>" GETARG["Param"] "</b> is invalid." } } else { Document = "<FORM method=GET><h4>Change one parameter</h4>\ <TABLE BORDER CELLPADDING=5>\ <TR><TD>Parameter</TD><TD>Value</TD></TR>\ <TR><TD><input type=text name=Param value=\"\" size=20></TD>\ <TD><input type=text name=Value value=\"\" size=40></TD>\ </TR></TABLE><input type=submit value=\"Set\"></FORM>" } } else if (MENU[2] == "SaveConfig") { for (i in config) printf("%s %s\n", i, config[i]) > ConfigFile close(ConfigFile) Document = "Configuration has been saved." } }
We could also view the configuration file as a database. From this point of view, the previous program acts like a primitive database server. Real SQL database systems also make a service available by providing a TCP port that clients can connect to. But the application level protocols they use are usually proprietary and also change from time to time. This is also true for the protocol that MiniSQL uses.
Most people who make heavy use of Internet resources have a large
bookmark file with pointers to interesting web sites. It is impossible
to regularly check by hand if any of these sites have changed. A program
is needed to automatically look at the headers of web pages and tell
which ones have changed. URLCHK does the comparison after using GETURL
with the HEAD
method to retrieve the header.
Like GETURL, this program first checks that it is called with exactly
one command-line parameter. URLCHK also takes the same command-line variables
Proxy
and ProxyPort
as GETURL,
because these variables are handed over to GETURL for each URL
that gets checked. The one and only parameter is the name of a file that
contains one line for each URL. In the first column, we find the URL, and
the second and third columns hold the length of the URL's body when checked
for the two last times. Now, we follow this plan:
It may seem a bit peculiar to read the URLs from a file together with their two most recent lengths, but this approach has several advantages. You can call the program again and again with the same file. After running the program, you can regenerate the changed URLs by extracting those lines that differ in their second and third columns:
BEGIN { if (ARGC != 2) { print "URLCHK - check if URLs have changed" print "IN:\n the file with URLs as a command-line parameter" print " file contains URL, old length, new length" print "PARAMS:\n -v Proxy=MyProxy -v ProxyPort=8080" print "OUT:\n same as file with URLs" print "JK 02.03.1998" exit } URLfile = ARGV[1]; ARGV[1] = "" if (Proxy != "") Proxy = " -v Proxy=" Proxy if (ProxyPort != "") ProxyPort = " -v ProxyPort=" ProxyPort while ((getline < URLfile) > 0) Length[$1] = $3 + 0 close(URLfile) # now, URLfile is read in and can be updated GetHeader = "gawk " Proxy ProxyPort " -v Method=\"HEAD\" -f geturl.awk " for (i in Length) { GetThisHeader = GetHeader i " 2>&1" while ((GetThisHeader | getline) > 0) if (toupper($0) ~ /CONTENT-LENGTH/) NewLength = $2 + 0 close(GetThisHeader) print i, Length[i], NewLength > URLfile if (Length[i] != NewLength) # report only changed URLs print i, Length[i], NewLength } close(URLfile) }
Another thing that may look strange is the way GETURL is called.
Before calling GETURL, we have to check if the proxy variables need
to be passed on. If so, we prepare strings that will become part
of the command line later. In GetHeader
, we store these strings
together with the longest part of the command line. Later, in the loop
over the URLs, GetHeader
is appended with the URL and a redirection
operator to form the command that reads the URL's header over the Internet.
GETURL always produces the headers over /dev/stderr. That is
the reason why we need the redirection operator to have the header
piped in.
This program is not perfect because it assumes that changing URLs results in changed lengths, which is not necessarily true. A more advanced approach is to look at some other header line that holds time information. But, as always when things get a bit more complicated, this is left as an exercise to the reader.
Sometimes it is necessary to extract links from web pages. Browsers do it, web robots do it, and sometimes even humans do it. Since we have a tool like GETURL at hand, we can solve this problem with some help from the Bourne shell:
BEGIN { RS = "http://[#%&\\+\\-\\./0-9\\:;\\?A-Z_a-z\\~]*" } RT != "" { command = ("gawk -v Proxy=MyProxy -f geturl.awk " RT \ " > doc" NR ".html") print command }
Notice that the regular expression for URLs is rather crude. A precise regular expression is much more complex. But this one works rather well. One problem is that it is unable to find internal links of an HTML document. Another problem is that `ftp', `telnet', `news', `mailto', and other kinds of links are missing in the regular expression. However, it is straightforward to add them, if doing so is necessary for other tasks.
This program reads an HTML file and prints all the HTTP links that it finds.
It relies on gawk's ability to use regular expressions as record
separators. With RS
set to a regular expression that matches links,
the second action is executed each time a non-empty link is found.
We can find the matching link itself in RT
.
The action could use the system
function to let another GETURL
retrieve the page, but here we use a different approach.
This simple program prints shell commands that can be piped into sh
for execution. This way it is possible to first extract
the links, wrap shell commands around them, and pipe all the shell commands
into a file. After editing the file, execution of the file retrieves
exactly those files that we really need. In case we do not want to edit,
we can retrieve all the pages like this:
gawk -f geturl.awk http://www.suse.de | gawk -f webgrab.awk | sh
After this, you will find the contents of all referenced documents in files named doc*.html even if they do not contain HTML code. The most annoying thing is that we always have to pass the proxy to GETURL. If you do not like to see the headers of the web pages appear on the screen, you can redirect them to /dev/null. Watching the headers appear can be quite interesting, because it reveals interesting details such as which web server the companies use. Now, it is clear how the clever marketing people use web robots to determine the market shares of Microsoft and Netscape in the web server market.
Port 80 of any web server is like a small hole in a repellent firewall. After attaching a browser to port 80, we usually catch a glimpse of the bright side of the server (its home page). With a tool like GETURL at hand, we are able to discover some of the more concealed or even “indecent” services (i.e., lacking conformity to standards of quality). It can be exciting to see the fancy CGI scripts that lie there, revealing the inner workings of the server, ready to be called:
gawk -f geturl.awk http://any.host.on.the.net/cgi-bin/
some servers give you a directory listing of the CGI files. Knowing the names, you can try to call some of them and watch for useful results. Sometimes there are executables in such directories (such as Perl interpreters) that you may call remotely. If there are subdirectories with configuration data of the web server, this can also be quite interesting to read.
gawk -f geturl.awk http://any.host.on.the.net/cgi-bin/test-cgi gawk -f geturl.awk http://any.host.on.the.net/cgi-bin/printenv
Caution: Although this may sound funny or simply irrelevant, we are talking about severe security holes. Try to explore your own system this way and make sure that none of the above reveals too much information about your system.
In the HTTP server examples we've shown thus far, we never present an image to the browser and its user. Presenting images is one task. Generating images that reflect some user input and presenting these dynamically generated images is another. In this section, we use GNUPlot for generating .png, .ps, or .gif files.9
The program we develop takes the statistical parameters of two samples
and computes the t-test statistics. As a result, we get the probabilities
that the means and the variances of both samples are the same. In order to
let the user check plausibility, the program presents an image of the
distributions. The statistical computation follows
Numerical Recipes in C: The Art of Scientific Computing
by William H. Press, Saul A. Teukolsky, William T. Vetterling, and Brian P. Flannery.
Since gawk does not have a built-in function
for the computation of the beta function, we use the ibeta
function
of GNUPlot. As a side effect, we learn how to use GNUPlot as a
sophisticated calculator. The comparison of means is done as in tutest
,
paragraph 14.2, page 613, and the comparison of variances is done as in ftest
,
page 611 in Numerical Recipes.
As usual, we take the site-independent code for servers and append
our own functions SetUpServer
and HandleGET
:
function SetUpServer() { TopHeader = "<HTML><title>Statistics with GAWK</title>" TopDoc = "<BODY>\ <h2>Please choose one of the following actions:</h2>\ <UL>\ <LI><A HREF=" MyPrefix "/AboutServer>About this server</A></LI>\ <LI><A HREF=" MyPrefix "/EnterParameters>Enter Parameters</A></LI>\ </UL>" TopFooter = "</BODY></HTML>" GnuPlot = "gnuplot 2>&1" m1=m2=0; v1=v2=1; n1=n2=10 }
Here, you see the menu structure that the user sees. Later, we
will see how the program structure of the HandleGET
function
reflects the menu structure. What is missing here is the link for the
image we generate. In an event-driven environment, request,
generation, and delivery of images are separated.
Notice the way we initialize the GnuPlot
command string for
the pipe. By default,
GNUPlot outputs the generated image via standard output, as well as
the results of print
(ed) calculations via standard error.
The redirection causes standard error to be mixed into standard
output, enabling us to read results of calculations with getline
.
By initializing the statistical parameters with some meaningful
defaults, we make sure the user gets an image the first time
he uses the program.
Following is the rather long function HandleGET
, which
implements the contents of this service by reacting to the different
kinds of requests from the browser. Before you start playing with
this script, make sure that your browser supports JavaScript and that it also
has this option switched on. The script uses a short snippet of
JavaScript code for delayed opening of a window with an image.
A more detailed explanation follows:
function HandleGET() { if(MENU[2] == "AboutServer") { Document = "This is a GUI for a statistical computation.\ It compares means and variances of two distributions.\ It is implemented as one GAWK script and uses GNUPLOT." } else if (MENU[2] == "EnterParameters") { Document = "" if ("m1" in GETARG) { # are there parameters to compare? Document = Document "<SCRIPT LANGUAGE=\"JavaScript\">\ setTimeout(\"window.open(\\\"" MyPrefix "/Image" systime()\ "\\\",\\\"dist\\\", \\\"status=no\\\");\", 1000); </SCRIPT>" m1 = GETARG["m1"]; v1 = GETARG["v1"]; n1 = GETARG["n1"] m2 = GETARG["m2"]; v2 = GETARG["v2"]; n2 = GETARG["n2"] t = (m1-m2)/sqrt(v1/n1+v2/n2) df = (v1/n1+v2/n2)*(v1/n1+v2/n2)/((v1/n1)*(v1/n1)/(n1-1) \ + (v2/n2)*(v2/n2) /(n2-1)) if (v1>v2) { f = v1/v2 df1 = n1 - 1 df2 = n2 - 1 } else { f = v2/v1 df1 = n2 - 1 df2 = n1 - 1 } print "pt=ibeta(" df/2 ",0.5," df/(df+t*t) ")" |& GnuPlot print "pF=2.0*ibeta(" df2/2 "," df1/2 "," \ df2/(df2+df1*f) ")" |& GnuPlot print "print pt, pF" |& GnuPlot RS="\n"; GnuPlot |& getline; RS="\r\n" # $1 is pt, $2 is pF print "invsqrt2pi=1.0/sqrt(2.0*pi)" |& GnuPlot print "nd(x)=invsqrt2pi/sd*exp(-0.5*((x-mu)/sd)**2)" |& GnuPlot print "set term png small color" |& GnuPlot #print "set term postscript color" |& GnuPlot #print "set term gif medium size 320,240" |& GnuPlot print "set yrange[-0.3:]" |& GnuPlot print "set label 'p(m1=m2) =" $1 "' at 0,-0.1 left" |& GnuPlot print "set label 'p(v1=v2) =" $2 "' at 0,-0.2 left" |& GnuPlot print "plot mu=" m1 ",sd=" sqrt(v1) ", nd(x) title 'sample 1',\ mu=" m2 ",sd=" sqrt(v2) ", nd(x) title 'sample 2'" |& GnuPlot print "quit" |& GnuPlot GnuPlot |& getline Image while ((GnuPlot |& getline) > 0) Image = Image RS $0 close(GnuPlot) } Document = Document "\ <h3>Do these samples have the same Gaussian distribution?</h3>\ <FORM METHOD=GET> <TABLE BORDER CELLPADDING=5>\ <TR>\ <TD>1. Mean </TD> <TD><input type=text name=m1 value=" m1 " size=8></TD>\ <TD>1. Variance</TD> <TD><input type=text name=v1 value=" v1 " size=8></TD>\ <TD>1. Count </TD> <TD><input type=text name=n1 value=" n1 " size=8></TD>\ </TR><TR>\ <TD>2. Mean </TD> <TD><input type=text name=m2 value=" m2 " size=8></TD>\ <TD>2. Variance</TD> <TD><input type=text name=v2 value=" v2 " size=8></TD>\ <TD>2. Count </TD> <TD><input type=text name=n2 value=" n2 " size=8></TD>\ </TR> <input type=submit value=\"Compute\">\ </TABLE></FORM><BR>" } else if (MENU[2] ~ "Image") { Reason = "OK" ORS "Content-type: image/png" #Reason = "OK" ORS "Content-type: application/x-postscript" #Reason = "OK" ORS "Content-type: image/gif" Header = Footer = "" Document = Image } }
As usual, we give a short description of the service in the first
menu choice. The third menu choice shows us that generation and
presentation of an image are two separate actions. While the latter
takes place quite instantly in the third menu choice, the former
takes place in the much longer second choice. Image data passes from the
generating action to the presenting action via the variable Image
that contains a complete .png image, which is otherwise stored
in a file. If you prefer .ps or .gif images over the
default .png images, you may select these options by uncommenting
the appropriate lines. But remember to do so in two places: when
telling GNUPlot which kind of images to generate, and when transmitting the
image at the end of the program.
Looking at the end of the program, the way we pass the `Content-type' to the browser is a bit unusual. It is appended to the `OK' of the first header line to make sure the type information becomes part of the header. The other variables that get transmitted across the network are made empty, because in this case we do not have an HTML document to transmit, but rather raw image data to contain in the body.
Most of the work is done in the second menu choice. It starts with a
strange JavaScript code snippet. When first implementing this server,
we used a short "<IMG SRC=" MyPrefix "/Image>"
here. But then
browsers got smarter and tried to improve on speed by requesting the
image and the HTML code at the same time. When doing this, the browser
tries to build up a connection for the image request while the request for
the HTML text is not yet completed. The browser tries to connect
to the gawk server on port 8080 while port 8080 is still in use for
transmission of the HTML text. The connection for the image cannot be
built up, so the image appears as “broken” in the browser window.
We solved this problem by telling the browser to open a separate window
for the image, but only after a delay of 1000 milliseconds.
By this time, the server should be ready for serving the next request.
But there is one more subtlety in the JavaScript code.
Each time the JavaScript code opens a window for the image, the
name of the image is appended with a timestamp (systime
).
Why this constant change of name for the image? Initially, we always named
the image Image
, but then the Netscape browser noticed the name
had not changed since the previous request and displayed the
previous image (caching behavior). The server core
is implemented so that browsers are told not to cache anything.
Obviously HTTP requests do not always work as expected. One way to
circumvent the cache of such overly smart browsers is to change the
name of the image with each request. These three lines of JavaScript
caused us a lot of trouble.
The rest can be broken down into two phases. At first, we check if there are statistical parameters. When the program is first started, there usually are no parameters because it enters the page coming from the top menu. Then, we only have to present the user a form that he can use to change statistical parameters and submit them. Subsequently, the submission of the form causes the execution of the first phase because now there are parameters to handle.
Now that we have parameters, we know there will be an image available.
Therefore we insert the JavaScript code here to initiate the opening
of the image in a separate window. Then,
we prepare some variables that will be passed to GNUPlot for calculation
of the probabilities. Prior to reading the results, we must temporarily
change RS
because GNUPlot separates lines with newlines.
After instructing GNUPlot to generate a .png (or .ps or
.gif) image, we initiate the insertion of some text,
explaining the resulting probabilities. The final `plot' command
actually generates the image data. This raw binary has to be read in carefully
without adding, changing, or deleting a single byte. Hence the unusual
initialization of Image
and completion with a while
loop.
When using this server, it soon becomes clear that it is far from being perfect. It mixes source code of six scripting languages or protocols:
After all this work, the GNUPlot image opens in the JavaScript window where it can be viewed by the user.
It is probably better not to mix up so many different languages. The result is not very readable. Furthermore, the statistical part of the server does not take care of invalid input. Among others, using negative variances will cause invalid results.
In the long run, every program becomes rococo, and then rubble.
Alan Perlis
By now, we know how to present arbitrary `Content-type's to a browser.
In this section, our server will present a 3D world to our browser.
The 3D world is described in a scene description language (VRML,
Virtual Reality Modeling Language) that allows us to travel through a
perspective view of a 2D maze with our browser. Browsers with a
VRML plugin enable exploration of this technology. We could do
one of those boring `Hello world' examples here, that are usually
presented when introducing novices to
VRML. If you have never written
any VRML code, have a look at
the VRML FAQ.
Presenting a static VRML scene is a bit trivial; in order to expose
gawk's new capabilities, we will present a dynamically generated
VRML scene. The function SetUpServer
is very simple because it
only sets the default HTML page and initializes the random number
generator. As usual, the surrounding server lets you browse the maze.
function SetUpServer() { TopHeader = "<HTML><title>Walk through a maze</title>" TopDoc = "\ <h2>Please choose one of the following actions:</h2>\ <UL>\ <LI><A HREF=" MyPrefix "/AboutServer>About this server</A>\ <LI><A HREF=" MyPrefix "/VRMLtest>Watch a simple VRML scene</A>\ </UL>" TopFooter = "</HTML>" srand() }
The function HandleGET
is a bit longer because it first computes
the maze and afterwards generates the VRML code that is sent across
the network. As shown in the STATIST example
(see STATIST),
we set the type of the
content to VRML and then store the VRML representation of the maze as the
page content. We assume that the maze is stored in a 2D array. Initially,
the maze consists of walls only. Then, we add an entry and an exit to the
maze and let the rest of the work be done by the function MakeMaze
.
Now, only the wall fields are left in the maze. By iterating over the these
fields, we generate one line of VRML code for each wall field.
function HandleGET() { if (MENU[2] == "AboutServer") { Document = "If your browser has a VRML 2 plugin,\ this server shows you a simple VRML scene." } else if (MENU[2] == "VRMLtest") { XSIZE = YSIZE = 11 # initially, everything is wall for (y = 0; y < YSIZE; y++) for (x = 0; x < XSIZE; x++) Maze[x, y] = "#" delete Maze[0, 1] # entry is not wall delete Maze[XSIZE-1, YSIZE-2] # exit is not wall MakeMaze(1, 1) Document = "\ #VRML V2.0 utf8\n\ Group {\n\ children [\n\ PointLight {\n\ ambientIntensity 0.2\n\ color 0.7 0.7 0.7\n\ location 0.0 8.0 10.0\n\ }\n\ DEF B1 Background {\n\ skyColor [0 0 0, 1.0 1.0 1.0 ]\n\ skyAngle 1.6\n\ groundColor [1 1 1, 0.8 0.8 0.8, 0.2 0.2 0.2 ]\n\ groundAngle [ 1.2 1.57 ]\n\ }\n\ DEF Wall Shape {\n\ geometry Box {size 1 1 1}\n\ appearance Appearance { material Material { diffuseColor 0 0 1 } }\n\ }\n\ DEF Entry Viewpoint {\n\ position 0.5 1.0 5.0\n\ orientation 0.0 0.0 -1.0 0.52\n\ }\n" for (i in Maze) { split(i, t, SUBSEP) Document = Document " Transform { translation " Document = Document t[1] " 0 -" t[2] " children USE Wall }\n" } Document = Document " ] # end of group for world\n}" Reason = "OK" ORS "Content-type: model/vrml" Header = Footer = "" } }
Finally, we have a look at MakeMaze
, the function that generates
the Maze
array. When entered, this function assumes that the array
has been initialized so that each element represents a wall element and
the maze is initially full of wall elements. Only the entrance and the exit
of the maze should have been left free. The parameters of the function tell
us which element must be marked as not being a wall. After this, we take
a look at the four neighbouring elements and remember which we have already
treated. Of all the neighbouring elements, we take one at random and
walk in that direction. Therefore, the wall element in that direction has
to be removed and then, we call the function recursively for that element.
The maze is only completed if we iterate the above procedure for
all neighbouring elements (in random order) and for our present
element by recursively calling the function for the present element. This
last iteration could have been done in a loop,
but it is done much simpler recursively.
Notice that elements with coordinates that are both odd are assumed to be
on our way through the maze and the generating process cannot terminate
as long as there is such an element not being delete
d. All other
elements are potentially part of the wall.
function MakeMaze(x, y) { delete Maze[x, y] # here we are, we have no wall here p = 0 # count unvisited fields in all directions if (x-2 SUBSEP y in Maze) d[p++] = "-x" if (x SUBSEP y-2 in Maze) d[p++] = "-y" if (x+2 SUBSEP y in Maze) d[p++] = "+x" if (x SUBSEP y+2 in Maze) d[p++] = "+y" if (p>0) { # if there are univisited fields, go there p = int(p*rand()) # choose one unvisited field at random if (d[p] == "-x") { delete Maze[x - 1, y]; MakeMaze(x - 2, y) } else if (d[p] == "-y") { delete Maze[x, y - 1]; MakeMaze(x, y - 2) } else if (d[p] == "+x") { delete Maze[x + 1, y]; MakeMaze(x + 2, y) } else if (d[p] == "+y") { delete Maze[x, y + 1]; MakeMaze(x, y + 2) } # we are back from recursion MakeMaze(x, y); # try again while there are unvisited fields } }
There are two ways of constructing a software design: One way is to make it so simple that there are obviously no deficiencies, and the other way is to make it so complicated that there are no obvious deficiencies.
C. A. R. Hoare
A mobile agent is a program that can be dispatched from a computer and transported to a remote server for execution. This is called migration, which means that a process on another system is started that is independent from its originator. Ideally, it wanders through a network while working for its creator or owner. In places like the UMBC Agent Web, people are quite confident that (mobile) agents are a software engineering paradigm that enables us to significantly increase the efficiency of our work. Mobile agents could become the mediators between users and the networking world. For an unbiased view at this technology, see the remarkable paper Mobile Agents: Are they a good idea?.10
When trying to migrate a process from one system to another, a server process is needed on the receiving side. Depending on the kind of server process, several ways of implementation come to mind. How the process is implemented depends upon the kind of server process:
POST
method to transfer
some data to a file on the web server. When a CGI script is called
remotely with the POST
method instead of the usual GET
method,
data is transmitted from the client process to the standard input
of the server's CGI script. So, to implement a mobile agent,
we must not only write the agent program to start on the client
side, but also the CGI script to receive the agent on the server side.
PUT
method can also be used for migration. HTTP does not
require a CGI script for migration via PUT
. However, with common web
servers there is no advantage to this solution, because web servers such as
Apache
require explicit activation of a special PUT
script.
Our agent example abuses a common web server as a migration tool. So, it needs a
universal CGI script on the receiving side (the web server). The receiving script is
activated with a POST
request when placed into a location like
/httpd/cgi-bin/PostAgent.sh. Make sure that the server system uses a
version of gawk that supports network access (Version 3.1 or later;
verify with `gawk --version').
#!/bin/sh MobAg=/tmp/MobileAgent.$$ # direct script to mobile agent file cat > $MobAg # execute agent concurrently gawk -f $MobAg $MobAg > /dev/null & # HTTP header, terminator and body gawk 'BEGIN { print "\r\nAgent started" }' rm $MobAg # delete script file of agent
By making its process id ($$
) part of the unique file name, the
script avoids conflicts between concurrent instances of the script.
First, all lines
from standard input (the mobile agent's source code) are copied into
this unique file. Then, the agent is started as a concurrent process
and a short message reporting this fact is sent to the submitting client.
Finally, the script file of the mobile agent is removed because it is
no longer needed. Although it is a short script, there are several noteworthy
points:
The originating agent itself is started just like any other command-line
script, and reports the results on standard output. By letting the name
of the original host migrate with the agent, the agent that migrates
to a host far away from its origin can report the result back home.
Having arrived at the end of the journey, the agent establishes
a connection and reports the results. This is the reason for
determining the name of the host with `uname -n' and storing it
in MyOrigin
for later use. We may also set variables with the
-v option from the command line. This interactivity is only
of importance in the context of starting a mobile agent; therefore this
BEGIN
pattern and its action do not take part in migration:
BEGIN { if (ARGC != 2) { print "MOBAG - a simple mobile agent" print "CALL:\n gawk -f mobag.awk mobag.awk" print "IN:\n the name of this script as a command-line parameter" print "PARAM:\n -v MyOrigin=myhost.com" print "OUT:\n the result on stdout" print "JK 29.03.1998 01.04.1998" exit } if (MyOrigin == "") { "uname -n" | getline MyOrigin close("uname -n") } }
Since gawk cannot manipulate and transmit parts of the program directly, the source code is read and stored in strings. Therefore, the program scans itself for the beginning and the ending of functions. Each line in between is appended to the code string until the end of the function has been reached. A special case is this part of the program itself. It is not a function. Placing a similar framework around it causes it to be treated like a function. Notice that this mechanism works for all the functions of the source code, but it cannot guarantee that the order of the functions is preserved during migration:
#ReadMySelf /^function / { FUNC = $2 } /^END/ || /^#ReadMySelf/ { FUNC = $1 } FUNC != "" { MOBFUN[FUNC] = MOBFUN[FUNC] RS $0 } (FUNC != "") && (/^}/ || /^#EndOfMySelf/) \ { FUNC = "" } #EndOfMySelf
The web server code in A Web Service with Interaction, was first developed as a site-independent core. Likewise, the gawk-based mobile agent starts with an agent-independent core, to which can be appended application-dependent functions. What follows is the only application-independent function needed for the mobile agent:
function migrate(Destination, MobCode, Label) { MOBVAR["Label"] = Label MOBVAR["Destination"] = Destination RS = ORS = "\r\n" HttpService = "/inet/tcp/0/" Destination for (i in MOBFUN) MobCode = (MobCode "\n" MOBFUN[i]) MobCode = MobCode "\n\nBEGIN {" for (i in MOBVAR) MobCode = (MobCode "\n MOBVAR[\"" i "\"] = \"" MOBVAR[i] "\"") MobCode = MobCode "\n}\n" print "POST /cgi-bin/PostAgent.sh HTTP/1.0" |& HttpService print "Content-length:", length(MobCode) ORS |& HttpService printf "%s", MobCode |& HttpService while ((HttpService |& getline) > 0) print $0 close(HttpService) }
The migrate
function prepares the
aforementioned strings containing the program code and transmits them to a
server. A consequence of this modular approach is that the migrate
function takes some parameters that aren't needed in this application,
but that will be in future ones. Its mandatory parameter Destination
holds the
name (or IP address) of the server that the agent wants as a host for its
code. The optional parameter MobCode
may contain some gawk
code that is inserted during migration in front of all other code.
The optional parameter Label
may contain
a string that tells the agent what to do in program execution after
arrival at its new home site. One of the serious obstacles in implementing
a framework for mobile agents is that it does not suffice to migrate the
code. It is also necessary to migrate the state of execution of the agent. In
contrast to Agent Tcl, this program does not try to migrate the complete set
of variables. The following conventions are used:
MOBFUN
shown above is an exception. It is handled
by the function migrate
and does migrate with the application.
MOBVAR
. Each variable that
takes part in migration has to be an element of this array.
migrate
also takes care of this.
Now it's clear what happens to the Label
parameter of the
function migrate
. It is copied into MOBVAR["Label"]
and
travels alongside the other data. Since travelling takes place via HTTP,
records must be separated with "\r\n"
in RS
and
ORS
as usual. The code assembly for migration takes place in
three steps:
MOBFUN
to collect all functions verbatim.
BEGIN
pattern and put assignments to mobile
variables into the action part.
Content-length
is followed by the body. In case there is
any reply over the network, it is read completely and echoed to
standard output to avoid irritating the server.
The application-independent framework is now almost complete. What follows
is the END
pattern that is executed when the mobile agent has
finished reading its own code. First, it checks whether it is already
running on a remote host or not. In case initialization has not yet taken
place, it starts MyInit
. Otherwise (later, on a remote host), it
starts MyJob
:
END { if (ARGC != 2) exit # stop when called with wrong parameters if (MyOrigin != "") # is this the originating host? MyInit() # if so, initialize the application else # we are on a host with migrated data MyJob() # so we do our job }
All that's left to extend the framework into a complete application
is to write two application-specific functions: MyInit
and
MyJob
. Keep in mind that the former is executed once on the
originating host, while the latter is executed after each migration:
function MyInit() { MOBVAR["MyOrigin"] = MyOrigin MOBVAR["Machines"] = "localhost/80 max/80 moritz/80 castor/80" split(MOBVAR["Machines"], Machines) # which host is the first? migrate(Machines[1], "", "") # go to the first host while (("/inet/tcp/8080/0/0" |& getline) > 0) # wait for result print $0 # print result close("/inet/tcp/8080/0/0") }
As mentioned earlier, this agent takes the name of its origin
(MyOrigin
) with it. Then, it takes the name of its first
destination and goes there for further work. Notice that this name has
the port number of the web server appended to the name of the server,
because the function migrate
needs it this way to create
the HttpService
variable. Finally, it waits for the result to arrive.
The MyJob
function runs on the remote host:
function MyJob() { # forget this host sub(MOBVAR["Destination"], "", MOBVAR["Machines"]) MOBVAR["Result"]=MOBVAR["Result"] SUBSEP SUBSEP MOBVAR["Destination"] ":" while (("who" | getline) > 0) # who is logged in? MOBVAR["Result"] = MOBVAR["Result"] SUBSEP $0 close("who") if (index(MOBVAR["Machines"], "/") > 0) { # any more machines to visit? split(MOBVAR["Machines"], Machines) # which host is next? migrate(Machines[1], "", "") # go there } else { # no more machines gsub(SUBSEP, "\n", MOBVAR["Result"]) # send result to origin print MOBVAR["Result"] |& "/inet/tcp/0/" MOBVAR["MyOrigin"] "/8080" close("/inet/tcp/0/" MOBVAR["MyOrigin"] "/8080") } }
After migrating, the first thing to do in MyJob
is to delete
the name of the current host from the list of hosts to visit. Now, it
is time to start the real work by appending the host's name to the
result string, and reading line by line who is logged in on this host.
A very annoying circumstance is the fact that the elements of
MOBVAR
cannot hold the newline character ("\n"
). If they
did, migration of this string did not work because the string didn't
obey the syntax rule for a string in gawk.
SUBSEP
is used as a temporary replacement.
If the list of hosts to visit holds
at least one more entry, the agent migrates to that place to go on
working there. Otherwise, we replace the SUBSEP
s
with a newline character in the resulting string, and report it to
the originating host, whose name is stored in MOBVAR["MyOrigin"]
.
Far out in the uncharted backwaters of the unfashionable end of the Western Spiral arm of the Galaxy lies a small unregarded yellow sun.Orbiting this at a distance of roughly ninety-two million miles is an utterly insignificant little blue-green planet whose ape-descendent life forms are so amazingly primitive that they still think digital watches are a pretty neat idea.
This planet has — or rather had — a problem, which was this: most of the people living on it were unhappy for pretty much of the time. Many solutions were suggested for this problem, but most of these were largely concerned with the movements of small green pieces of paper, which is odd because it wasn't the small green pieces of paper that were unhappy.
Douglas Adams, The Hitch Hiker's Guide to the Galaxy
Valuable services on the Internet are usually not implemented as mobile agents. There are much simpler ways of implementing services. All Unix systems provide, for example, the cron service. Unix system users can write a list of tasks to be done each day, each week, twice a day, or just once. The list is entered into a file named crontab. For example, to distribute a newsletter on a daily basis this way, use cron for calling a script each day early in the morning.
# run at 8 am on weekdays, distribute the newsletter 0 8 * * 1-5 $HOME/bin/daily.job >> $HOME/log/newsletter 2>&1
The script first looks for interesting information on the Internet, assembles it in a nice form and sends the results via email to the customers.
The following is an example of a primitive newsletter on stock market prediction. It is a report which first tries to predict the change of each share in the Dow Jones Industrial Index for the particular day. Then it mentions some especially promising shares as well as some shares which look remarkably bad on that day. The report ends with the usual disclaimer which tells every child not to try this at home and hurt anybody.
Good morning Uncle Scrooge, This is your daily stock market report for Monday, October 16, 2000. Here are the predictions for today: AA neutral GE up JNJ down MSFT neutral ... UTX up DD down IBM up MO down WMT up DIS up INTC up MRK down XOM down EK down IP down The most promising shares for today are these: INTC http://biz.yahoo.com/n/i/intc.html The stock shares to avoid today are these: EK http://biz.yahoo.com/n/e/ek.html IP http://biz.yahoo.com/n/i/ip.html DD http://biz.yahoo.com/n/d/dd.html ...
The script as a whole is rather long. In order to ease the pain of studying other people's source code, we have broken the script up into meaningful parts which are invoked one after the other. The basic structure of the script is as follows:
BEGIN { Init() ReadQuotes() CleanUp() Prediction() Report() SendMail() }
The earlier parts store data into variables and arrays which are
subsequently used by later parts of the script. The Init
function
first checks if the script is invoked correctly (without any parameters).
If not, it informs the user of the correct usage. What follows are preparations
for the retrieval of the historical quote data. The names of the 30 stock
shares are stored in an array name
along with the current date
in day
, month
, and year
.
All users who are separated from the Internet by a firewall and have to direct their Internet accesses to a proxy must supply the name of the proxy to this script with the `-v Proxy=name' option. For most users, the default proxy and port number should suffice.
function Init() { if (ARGC != 1) { print "STOXPRED - daily stock share prediction" print "IN:\n no parameters, nothing on stdin" print "PARAM:\n -v Proxy=MyProxy -v ProxyPort=80" print "OUT:\n commented predictions as email" print "JK 09.10.2000" exit } # Remember ticker symbols from Dow Jones Industrial Index StockCount = split("AA GE JNJ MSFT AXP GM JPM PG BA HD KO \ SBC C HON MCD T CAT HWP MMM UTX DD IBM MO WMT DIS INTC \ MRK XOM EK IP", name); # Remember the current date as the end of the time series day = strftime("%d") month = strftime("%m") year = strftime("%Y") if (Proxy == "") Proxy = "chart.yahoo.com" if (ProxyPort == 0) ProxyPort = 80 YahooData = "/inet/tcp/0/" Proxy "/" ProxyPort }
There are two really interesting parts in the script. One is the function which reads the historical stock quotes from an Internet server. The other is the one that does the actual prediction. In the following function we see how the quotes are read from the Yahoo server. The data which comes from the server is in CSV format (comma-separated values):
Date,Open,High,Low,Close,Volume 9-Oct-00,22.75,22.75,21.375,22.375,7888500 6-Oct-00,23.8125,24.9375,21.5625,22,10701100 5-Oct-00,24.4375,24.625,23.125,23.50,5810300
Lines contain values of the same time instant, whereas columns are
separated by commas and contain the kind of data that is described
in the header (first) line. At first, gawk is instructed to
separate columns by commas (`FS = ","'). In the loop that follows,
a connection to the Yahoo server is first opened, then a download takes
place, and finally the connection is closed. All this happens once for
each ticker symbol. In the body of this loop, an Internet address is
built up as a string according to the rules of the Yahoo server. The
starting and ending date are chosen to be exactly the same, but one year
apart in the past. All the action is initiated within the printf
command which transmits the request for data to the Yahoo server.
In the inner loop, the server's data is first read and then scanned
line by line. Only lines which have six columns and the name of a month
in the first column contain relevant data. This data is stored
in the two-dimensional array quote
; one dimension
being time, the other being the ticker symbol. During retrieval of the
first stock's data, the calendar names of the time instances are stored
in the array day
because we need them later.
function ReadQuotes() { # Retrieve historical data for each ticker symbol FS = "," for (stock = 1; stock <= StockCount; stock++) { URL = "http://chart.yahoo.com/table.csv?s=" name[stock] \ "&a=" month "&b=" day "&c=" year-1 \ "&d=" month "&e=" day "&f=" year \ "g=d&q=q&y=0&z=" name[stock] "&x=.csv" printf("GET " URL " HTTP/1.0\r\n\r\n") |& YahooData while ((YahooData |& getline) > 0) { if (NF == 6 && $1 ~ /Jan|Feb|Mar|Apr|May|Jun|Jul|Aug|Sep|Oct|Nov|Dec/) { if (stock == 1) days[++daycount] = $1; quote[$1, stock] = $5 } } close(YahooData) } FS = " " }
Now that we have the data, it can be checked once again to make sure that no individual stock is missing or invalid, and that all the stock quotes are aligned correctly. Furthermore, we renumber the time instances. The most recent day gets day number 1 and all other days get consecutive numbers. All quotes are rounded toward the nearest whole number in US Dollars.
function CleanUp() { # clean up time series; eliminate incomplete data sets for (d = 1; d <= daycount; d++) { for (stock = 1; stock <= StockCount; stock++) if (! ((days[d], stock) in quote)) stock = StockCount + 10 if (stock > StockCount + 1) continue datacount++ for (stock = 1; stock <= StockCount; stock++) data[datacount, stock] = int(0.5 + quote[days[d], stock]) } delete quote delete days }
Now we have arrived at the second really interesting part of the whole affair.
What we present here is a very primitive prediction algorithm:
If a stock fell yesterday, assume it will also fall today; if
it rose yesterday, assume it will rise today. (Feel free to replace this
algorithm with a smarter one.) If a stock changed in the same direction
on two consecutive days, this is an indication which should be highlighted.
Two-day advances are stored in hot
and two-day declines in
avoid
.
The rest of the function is a sanity check. It counts the number of correct predictions in relation to the total number of predictions one could have made in the year before.
function Prediction() { # Predict each ticker symbol by prolonging yesterday's trend for (stock = 1; stock <= StockCount; stock++) { if (data[1, stock] > data[2, stock]) { predict[stock] = "up" } else if (data[1, stock] < data[2, stock]) { predict[stock] = "down" } else { predict[stock] = "neutral" } if ((data[1, stock] > data[2, stock]) && (data[2, stock] > data[3, stock])) hot[stock] = 1 if ((data[1, stock] < data[2, stock]) && (data[2, stock] < data[3, stock])) avoid[stock] = 1 } # Do a plausibility check: how many predictions proved correct? for (s = 1; s <= StockCount; s++) { for (d = 1; d <= datacount-2; d++) { if (data[d+1, s] > data[d+2, s]) { UpCount++ } else if (data[d+1, s] < data[d+2, s]) { DownCount++ } else { NeutralCount++ } if (((data[d, s] > data[d+1, s]) && (data[d+1, s] > data[d+2, s])) || ((data[d, s] < data[d+1, s]) && (data[d+1, s] < data[d+2, s])) || ((data[d, s] == data[d+1, s]) && (data[d+1, s] == data[d+2, s]))) CorrectCount++ } } }
At this point the hard work has been done: the array predict
contains the predictions for all the ticker symbols. It is up to the
function Report
to find some nice words to introduce the
desired information.
function Report() { # Generate report report = "\nThis is your daily " report = report "stock market report for "strftime("%A, %B %d, %Y")".\n" report = report "Here are the predictions for today:\n\n" for (stock = 1; stock <= StockCount; stock++) report = report "\t" name[stock] "\t" predict[stock] "\n" for (stock in hot) { if (HotCount++ == 0) report = report "\nThe most promising shares for today are these:\n\n" report = report "\t" name[stock] "\t\thttp://biz.yahoo.com/n/" \ tolower(substr(name[stock], 1, 1)) "/" tolower(name[stock]) ".html\n" } for (stock in avoid) { if (AvoidCount++ == 0) report = report "\nThe stock shares to avoid today are these:\n\n" report = report "\t" name[stock] "\t\thttp://biz.yahoo.com/n/" \ tolower(substr(name[stock], 1, 1)) "/" tolower(name[stock]) ".html\n" } report = report "\nThis sums up to " HotCount+0 " winners and " AvoidCount+0 report = report " losers. When using this kind\nof prediction scheme for" report = report " the 12 months which lie behind us,\nwe get " UpCount report = report " 'ups' and " DownCount " 'downs' and " NeutralCount report = report " 'neutrals'. Of all\nthese " UpCount+DownCount+NeutralCount report = report " predictions " CorrectCount " proved correct next day.\n" report = report "A success rate of "\ int(100*CorrectCount/(UpCount+DownCount+NeutralCount)) "%.\n" report = report "Random choice would have produced a 33% success rate.\n" report = report "Disclaimer: Like every other prediction of the stock\n" report = report "market, this report is, of course, complete nonsense.\n" report = report "If you are stupid enough to believe these predictions\n" report = report "you should visit a doctor who can treat your ailment." }
The function SendMail
goes through the list of customers and opens
a pipe to the mail
command for each of them. Each one receives an
email message with a proper subject heading and is addressed with his full name.
function SendMail() { # send report to customers customer["uncle.scrooge@ducktown.gov"] = "Uncle Scrooge" customer["more@utopia.org" ] = "Sir Thomas More" customer["spinoza@denhaag.nl" ] = "Baruch de Spinoza" customer["marx@highgate.uk" ] = "Karl Marx" customer["keynes@the.long.run" ] = "John Maynard Keynes" customer["bierce@devil.hell.org" ] = "Ambrose Bierce" customer["laplace@paris.fr" ] = "Pierre Simon de Laplace" for (c in customer) { MailPipe = "mail -s 'Daily Stock Prediction Newsletter'" c print "Good morning " customer[c] "," | MailPipe print report "\n.\n" | MailPipe close(MailPipe) } }
Be patient when running the script by hand.
Retrieving the data for all the ticker symbols and sending the emails
may take several minutes to complete, depending upon network traffic
and the speed of the available Internet link.
The quality of the prediction algorithm is likely to be disappointing.
Try to find a better one.
Should you find one with a success rate of more than 50%, please tell
us about it! It is only for the sake of curiosity, of course. :-)
Hoare's Law of Large Problems: Inside every large problem is a small problem struggling to get out.
Yahoo's database of stock market data is just one among the many large databases on the Internet. Another one is located at NCBI (National Center for Biotechnology Information). Established in 1988 as a national resource for molecular biology information, NCBI creates public databases, conducts research in computational biology, develops software tools for analyzing genome data, and disseminates biomedical information. In this section, we look at one of NCBI's public services, which is called BLAST (Basic Local Alignment Search Tool).
You probably know that the information necessary for reproducing living cells is encoded in the genetic material of the cells. The genetic material is a very long chain of four base nucleotides. It is the order of appearance (the sequence) of nucleotides which contains the information about the substance to be produced. Scientists in biotechnology often find a specific fragment, determine the nucleotide sequence, and need to know where the sequence at hand comes from. This is where the large databases enter the game. At NCBI, databases store the knowledge about which sequences have ever been found and where they have been found. When the scientist sends his sequence to the BLAST service, the server looks for regions of genetic material in its database which look the most similar to the delivered nucleotide sequence. After a search time of some seconds or minutes the server sends an answer to the scientist. In order to make access simple, NCBI chose to offer their database service through popular Internet protocols. There are four basic ways to use the so-called BLAST services:
Our starting point is the demonstration client mentioned in the first option. The README file that comes along with the client explains the whole process in a nutshell. In the rest of this section, we first show what such requests look like. Then we show how to use gawk to implement a client in about 10 lines of code. Finally, we show how to interpret the result returned from the service.
Sequences are expected to be represented in the standard IUB/IUPAC amino acid and nucleic acid codes, with these exceptions: lower-case letters are accepted and are mapped into upper-case; a single hyphen or dash can be used to represent a gap of indeterminate length; and in amino acid sequences, `U' and `*' are acceptable letters (see below). Before submitting a request, any numerical digits in the query sequence should either be removed or replaced by appropriate letter codes (e.g., `N' for unknown nucleic acid residue or `X' for unknown amino acid residue). The nucleic acid codes supported are:
A --> adenosine M --> A C (amino) C --> cytidine S --> G C (strong) G --> guanine W --> A T (weak) T --> thymidine B --> G T C U --> uridine D --> G A T R --> G A (purine) H --> A C T Y --> T C (pyrimidine) V --> G C A K --> G T (keto) N --> A G C T (any) - gap of indeterminate length
Now you know the alphabet of nucleotide sequences. The last two lines of the following example query show you such a sequence, which is obviously made up only of elements of the alphabet just described. Store this example query into a file named protbase.request. You are now ready to send it to the server with the demonstration client.
PROGRAM blastn DATALIB month EXPECT 0.75 BEGIN >GAWK310 the gawking gene GNU AWK tgcttggctgaggagccataggacgagagcttcctggtgaagtgtgtttcttgaaatcat caccaccatggacagcaaa
The actual search request begins with the mandatory parameter `PROGRAM' in the first column followed by the value `blastn' (the name of the program) for searching nucleic acids. The next line contains the mandatory search parameter `DATALIB' with the value `month' for the newest nucleic acid sequences. The third line contains an optional `EXPECT' parameter and the value desired for it. The fourth line contains the mandatory `BEGIN' directive, followed by the query sequence in FASTA/Pearson format. Each line of information must be less than 80 characters in length.
The “month” database contains all new or revised sequences released in the last 30 days and is useful for searching against new sequences. There are five different blast programs, blastn being the one that compares a nucleotide query sequence against a nucleotide sequence database.
The last server directive that must appear in every request is the `BEGIN' directive. The query sequence should immediately follow the `BEGIN' directive and must appear in FASTA/Pearson format. A sequence in FASTA/Pearson format begins with a single-line description. The description line, which is required, is distinguished from the lines of sequence data that follow it by having a greater-than (`>') symbol in the first column. For the purposes of the BLAST server, the text of the description is arbitrary.
If you prefer to use a client written in gawk, just store the following 10 lines of code into a file named protbase.awk and use this client instead. Invoke it with `gawk -f protbase.awk protbase.request'. Then wait a minute and watch the result coming in. In order to replicate the demonstration client's behaviour as closely as possible, this client does not use a proxy server. We could also have extended the client program in Retrieving Web Pages, to implement the client request from protbase.awk as a special case.
{ request = request "\n" $0 } END { BLASTService = "/inet/tcp/0/www.ncbi.nlm.nih.gov/80" printf "POST /cgi-bin/BLAST/nph-blast_report HTTP/1.0\n" |& BLASTService printf "Content-Length: " length(request) "\n\n" |& BLASTService printf request |& BLASTService while ((BLASTService |& getline) > 0) print $0 close(BLASTService) }
The demonstration client from NCBI is 214 lines long (written in C) and it is not immediately obvious what it does. Our client is so short that it is obvious what it does. First it loops over all lines of the query and stores the whole query into a variable. Then the script establishes an Internet connection to the NCBI server and transmits the query by framing it with a proper HTTP request. Finally it receives and prints the complete result coming from the server.
Now, let us look at the result. It begins with an HTTP header, which you can ignore. Then there are some comments about the query having been filtered to avoid spuriously high scores. After this, there is a reference to the paper that describes the software being used for searching the data base. After a repitition of the original query's description we find the list of significant alignments:
Sequences producing significant alignments: (bits) Value gb|AC021182.14|AC021182 Homo sapiens chromosome 7 clone RP11-733... 38 0.20 gb|AC021056.12|AC021056 Homo sapiens chromosome 3 clone RP11-115... 38 0.20 emb|AL160278.10|AL160278 Homo sapiens chromosome 9 clone RP11-57... 38 0.20 emb|AL391139.11|AL391139 Homo sapiens chromosome X clone RP11-35... 38 0.20 emb|AL365192.6|AL365192 Homo sapiens chromosome 6 clone RP3-421H... 38 0.20 emb|AL138812.9|AL138812 Homo sapiens chromosome 11 clone RP1-276... 38 0.20 gb|AC073881.3|AC073881 Homo sapiens chromosome 15 clone CTD-2169... 38 0.20
This means that the query sequence was found in seven human chromosomes. But the value 0.20 (20%) means that the probability of an accidental match is rather high (20%) in all cases and should be taken into account. You may wonder what the first column means. It is a key to the specific database in which this occurence was found. The unique sequence identifiers reported in the search results can be used as sequence retrieval keys via the NCBI server. The syntax of sequence header lines used by the NCBI BLAST server depends on the database from which each sequence was obtained. The table below lists the identifiers for the databases from which the sequences were derived.
GenBank | gb|accession|locus
|
EMBL Data Library | emb|accession|locus
|
DDBJ, DNA Database of Japan | dbj|accession|locus
|
NBRF PIR | pir||entry
|
Protein Research Foundation | prf||name
|
SWISS-PROT | sp|accession|entry name
|
Brookhaven Protein Data Bank | pdb|entry|chain
|
Kabat's Sequences of Immuno... | gnl|kabat|identifier
|
Patents | pat|country|number
|
GenInfo Backbone Id | bbs|number
|
For example, an identifier might be `gb|AC021182.14|AC021182', where the `gb' tag indicates that the identifier refers to a GenBank sequence, `AC021182.14' is its GenBank ACCESSION, and `AC021182' is the GenBank LOCUS. The identifier contains no spaces, so that a space indicates the end of the identifier.
Let us continue in the result listing. Each of the seven alignments mentioned above is subsequently described in detail. We will have a closer look at the first of them.
>gb|AC021182.14|AC021182 Homo sapiens chromosome 7 clone RP11-733N23, WORKING DRAFT SEQUENCE, 4 unordered pieces Length = 176383 Score = 38.2 bits (19), Expect = 0.20 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 tggtgaagtgtgtttcttg 53 ||||||||||||||||||| Sbjct: 69786 tggtgaagtgtgtttcttg 69804
This alignment was located on the human chromosome 7. The fragment on which part of the query was found had a total length of 176383. Only 19 of the nucleotides matched and the matching sequence ran from character 35 to 53 in the query sequence and from 69786 to 69804 in the fragment on chromosome 7. If you are still reading at this point, you are probably interested in finding out more about Computational Biology and you might appreciate the following hints.
gawk
to prevail over other scripting languages such as perl
,
tcl
, or python
which are not even proper sequences. (:-)
This section lists the URLs for various items discussed in this chapter. They are presented in the order in which they appear.
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/inet/
files (gawk): Gawk Special Files/inet/raw
special files (gawk): File /inet/raw/inet/tcp
special files (gawk): File /inet/tcp/inet/udp
special files (gawk): File /inet/udp/inet/
(gawk): Gawk Special Files/inet/raw
(gawk): File /inet/raw/inet/tcp
(gawk): File /inet/tcp/inet/udp
(gawk): File /inet/udpgetline
command: TCP ConnectingORS
variable, HTTP and: Web pageORS
variable, POP and: EmailRS
variable, HTTP and: Web pageRS
variable, POP and: Email|
), |&
operator (I/O): TCP Connecting|
(vertical bar), |&
operator (I/O): TCP Connecting[1] It should be noted that although the Internet seems to have conquered the world, there are other networking protocol suites in existence and in use.
[2] In the days before voice mail systems!
[3] For the technically savvy, data reads block—if there's no incoming data, the program is made to wait until there is, instead of receiving a “there's no data” error return.
[4] This special file is reserved, but not otherwise currently implemented.
[5] Microsoft prefered to ignore the TCP/IP family of protocols until 1995. Then came the rise of the Netscape browser as a landmark “killer application.” Microsoft added TCP/IP support and their own browser to Microsoft Windows 95 at the last minute. They even back-ported their TCP/IP implementation to Microsoft Windows for Workgroups 3.11, but it was a rather rudimentary and half-hearted implementation. Nevertheless, the equivalent of /etc/services resides under C:\WINNT\system32\drivers\etc\services on Microsoft Windows 2000.
[6] Version 1.0 of HTTP was defined in RFC 1945. HTTP 1.1 was initially specified in RFC 2068. In June 1999, RFC 2068 was made obsolete by RFC 2616, an update without any substantial changes.
[7] As defined in RFC 2068.
[8] The version shown here is abbreviated. The full version comes with the gawk distribution.
[9] Due to licensing problems, the default installation of GNUPlot disables the generation of .gif files. If your installed version does not accept `set term gif', just download and install the most recent version of GNUPlot and the GD library by Thomas Boutell. Otherwise you still have the chance to generate some ASCII-art style images with GNUPlot by using `set term dumb'. (We tried it and it worked.)
[10] http://www.research.ibm.com/massive/mobag.ps